Pairwise Alignments

Query, 314 a.a., putative HTH-type transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

Subject, 319 a.a., HTH-type transcriptional regulator CdhR from Pseudomonas putida KT2440

 Score =  173 bits (439), Expect = 4e-48
 Identities = 108/308 (35%), Positives = 159/308 (51%), Gaps = 10/308 (3%)

Query: 12  QQIDLLLFDQFSGHCLANTVEPLRAANTLAGRQVYSWRFVTVDGGTAMSSARMEVTAQMP 71
           + I  LL   FS     + VEPLR AN   G Q+Y W+ +++DG   ++S  M + A   
Sbjct: 7   ETIAFLLVPGFSAMGFISAVEPLRVANRFGG-QLYRWQVLSLDGEAVLASNGMSINADAA 65

Query: 72  LHKAE-GDMLIAMPSYGYLRHTTEATARGLRAAQQRYGVLAGFDTGAWLLAAAGLLDGYR 130
           L + E  ++L+ +  +  L +        LR       +L G DTGA +LA AGLL+GYR
Sbjct: 66  LGEGEPANILLVVAGFEPLANVAPKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLEGYR 125

Query: 131 ATIHSSEMEAFADMFPAVQAETHRFLWDRDRLTSSGAMAAFDGILDMIAQQHGQALRLDV 190
           AT+H   +EAF + +P +QA    F  DR R+T +G  A+ D +L +IAQ HG  L + V
Sbjct: 126 ATLHWEALEAFKERYPGLQATQELFEIDRSRITCAGGTASIDLMLHLIAQSHGSELAVKV 185

Query: 191 AALF-LSESQSGSDRSS-------PVRSASVARAIRAMEANLETPLPLEEVARHAGRSLR 242
           +  F L   +   D           + +  +  AI  ME ++E PL   E+A     + R
Sbjct: 186 SEQFVLGRIRQRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLSTLELAAAIKVTRR 245

Query: 243 DLARRTRGELGTTPQALYRHLRLKQAKRLVLETDFSVAEIAVRCGYEDPSALTRAFRSAF 302
            L R  R  L  TP   Y  LRL +A++L+ +TD SV E+++ CG+E PS  TR ++  F
Sbjct: 246 QLERLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRYKLRF 305

Query: 303 ATTPRALR 310
              PR  R
Sbjct: 306 GRCPREER 313