Pairwise Alignments

Query, 325 a.a., thiamine-binding periplasmic protein ThiB from Phaeobacter inhibens DSM 17395

Subject, 327 a.a., thiamine ABC transporter, periplasmic binding protein from Enterobacter asburiae PDN3

 Score =  347 bits (891), Expect = e-100
 Identities = 183/326 (56%), Positives = 223/326 (68%), Gaps = 8/326 (2%)

Query: 5   VLAAGLLGATAAYADTPELIVYTYDSFVSDWGPGPAVEKAFEATCGCDLKLVGAGDGAAL 64
           VL    L A  A+A  P L VYTYDSF +DWGPGP V+KAFEA C C+LK V   DG +L
Sbjct: 5   VLPLLALFALPAFAK-PVLTVYTYDSFSADWGPGPVVKKAFEADCNCELKFVALEDGVSL 63

Query: 65  LARVKLEGARSDADVVLGLDTNLTAAAKATGLFADHAVSADYA-LPFAWEDATFAPYDWG 123
           L R+++EG  S ADVVLGLD NL  AA  T LFA   V+AD   +P  W++ TF P+D+G
Sbjct: 64  LNRLRMEGKNSKADVVLGLDNNLLEAASQTKLFAKSGVAADAVNVPGGWKNDTFVPFDYG 123

Query: 124 YFAFVHKAGM--GAPANFAELAESDLK--IVIQDPRSSTPGLGLLMWVKAAHGDKAPEIW 179
           YFAFV+        P +  EL ESD K  ++ +DPR+STPGLGLL+W++  +GDKAPE W
Sbjct: 124 YFAFVYDKNKLKNPPKSLKELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPEAW 183

Query: 180 DGLADNVLTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKAAAVFDEGHYMQ 239
             LA   +TVTKGWSEAYGLFL+GE+D+VLSYTTSPAYH+IAE+ D+ AAA F EGHY+Q
Sbjct: 184 QKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIAEKKDNYAAANFAEGHYLQ 243

Query: 240 VEVAGKLANSDQPELADQFLAFMVSDAFQSVIPTTNWMYPAVTPADGLPKGFETLVAPEK 299
           VEVA + A S QPELA++FL FMVS  FQ+ IP  NWMYP       LP GFE L  P  
Sbjct: 244 VEVAARTAASKQPELAEKFLKFMVSPGFQNAIPAGNWMYPVTNVT--LPAGFEQLTKPNT 301

Query: 300 SLLLSEDEAAALRDVALDEWLTALSR 325
           SL  +  + AA R   + EW  A+SR
Sbjct: 302 SLEFTPQQVAAQRAAWVSEWQRAVSR 327