Pairwise Alignments

Query, 325 a.a., thiamine-binding periplasmic protein ThiB from Phaeobacter inhibens DSM 17395

Subject, 327 a.a., thiamine ABC transporter substrate binding subunit from Escherichia coli ECOR38

 Score =  351 bits (900), Expect = e-101
 Identities = 181/321 (56%), Positives = 220/321 (68%), Gaps = 7/321 (2%)

Query: 10  LLGATAAYADTPELIVYTYDSFVSDWGPGPAVEKAFEATCGCDLKLVGAGDGAALLARVK 69
           LL  TA     P L VYTYDSF +DWGPGP V+KAFEA C C+LKLV   DG +LL R++
Sbjct: 9   LLLCTAPAFAKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLR 68

Query: 70  LEGARSDADVVLGLDTNLTAAAKATGLFADHAVSADYA-LPFAWEDATFAPYDWGYFAFV 128
           +EG  S ADVVLGLD NL  AA  TGLFA   V+AD   +P  W + TF P+D+GYFAFV
Sbjct: 69  MEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADTVNVPGGWNNDTFVPFDYGYFAFV 128

Query: 129 HKAGM--GAPANFAELAESDL--KIVIQDPRSSTPGLGLLMWVKAAHGDKAPEIWDGLAD 184
           +        P +  EL ESD   +++ QDPR+STPGLGLL+W++  +GD AP+ W  LA 
Sbjct: 129 YDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAK 188

Query: 185 NVLTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKAAAVFDEGHYMQVEVAG 244
             +TVTKGWSEAYGLFL+GE+D+VLSYTTSPAYH++ E+ D+ AAA F EGHY+QVEVA 
Sbjct: 189 KTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAA 248

Query: 245 KLANSDQPELADQFLAFMVSDAFQSVIPTTNWMYPAVTPADGLPKGFETLVAPEKSLLLS 304
           + A S QPELA +FL FMVS AFQ+ IPT NWMYP       LP GFE L  P  +L  +
Sbjct: 249 RTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVT--LPAGFEQLTKPATTLEFT 306

Query: 305 EDEAAALRDVALDEWLTALSR 325
             E AA R   + EW  A+SR
Sbjct: 307 PAEVAAQRQAWISEWQRAVSR 327