Pairwise Alignments

Query, 348 a.a., TRAP transporter, subunit DctP from Phaeobacter inhibens DSM 17395

Subject, 353 a.a., TRAP transporter solute receptor, unknown substrate 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  182 bits (461), Expect = 1e-50
 Identities = 111/326 (34%), Positives = 164/326 (50%), Gaps = 9/326 (2%)

Query: 11  AGAVALMAMGATSAMAQE--VTLKLHQFLPAQANVPKLILDVWADKVEASSDGRIKIDRY 68
           A A+A + +GA  A AQ+  V +K   +LPA   + KL  + WA  VEA+S G IK+  +
Sbjct: 21  AVAMATLLLGAAVAQAQDKAVEMKFAHWLPASHPLAKLGFEPWAKSVEAASKGSIKVALF 80

Query: 69  PSMQLGGKPPELMDQAIDGVADIVWTVVGYTPGRYPSTEVFELPFMMTNARAASHAYWEM 128
           P+ QLG K  +  D A DG+A++ W   GY  GR+P     ELPF++      S A  + 
Sbjct: 81  PAQQLG-KAADHYDMARDGIAEMTWVNPGYQAGRFPMIAAGELPFLIAKPGPGSAALDQW 139

Query: 129 FDEHMKDTEFKDVKILGTWVHGPGIIHTTDPVESPDDLRGMKIRGGGRSVNGLLTELGAT 188
           +  +   TE KDVK     VH  G  H   P+  P  L+GMKIR    +V   +T LGAT
Sbjct: 140 YRNYAA-TEMKDVKFCFAHVH-IGTFHAKKPITEPGQLKGMKIRSANGTVAQTMTLLGAT 197

Query: 189 PVGMPVPAIPEALSKGVIDGTTIPWEVTTALKVPELVENHTEFTGRALYTLTFVLAMNKE 248
            V +  P   +AL KGV D  T PW    +  + + V+ H++      Y   FV  +NK 
Sbjct: 198 NVQVSAPEARDALDKGVADAITFPWNSIVSFGIDKAVKFHSDM---RFYASDFVWVLNKP 254

Query: 249 KYESLPDDLKKAVDENSGLEFSVFAGGTMAD-ADTPAREFALDEGNNVITLDEEQTAIWR 307
            Y+ L    KK +D++   E++   GG   D  D+   +     G+ ++ +   Q  +W+
Sbjct: 255 WYDKLAAGQKKVIDDHCNNEWAGKVGGAWGDEEDSGQAKLEKTAGHTIVKISPAQLDVWK 314

Query: 308 EASQPIYKQWLDDMKAKGVDGDALLE 333
           +A  P+Y QW+    A G  G A L+
Sbjct: 315 KAVDPVYAQWVKAADASGNKGQAALD 340