Pairwise Alignments

Query, 409 a.a., RmuC DNA recombination family protein from Phaeobacter inhibens DSM 17395

Subject, 480 a.a., Recombinase RmuC from Rhodanobacter sp. FW510-T8

 Score =  102 bits (254), Expect = 2e-26
 Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 35/339 (10%)

Query: 52  HLGQSVQQLRGGVQHVSDAQANAQVQMIQTVETRLSAVQQQVNDRLSDNALRQARALADM 111
           H G+  QQ    +    + +     ++  T+E +L A+QQ       DNA +  +  A +
Sbjct: 132 HFGEQQQQRFSALSAEHEKRMG---EVRATLEAKLGAIQQ-------DNAAKLEQMRATV 181

Query: 112 QERLQESLHGSTKRTVTSLTQLQERLAVIDKAQDNITKLSGDVLGLQDILANKQTRGAFG 171
            E+L  +L     R   S   + ERL  + +    +  L+  V  L+ +L N +TRG  G
Sbjct: 182 DEKLHATLE---TRLGESFKLVSERLEAVQRGLGEMQSLATGVGDLKRVLGNVKTRGVLG 238

Query: 172 EIQLNDIVSKALPADSYAFQHTL--SNGKRADCLIYLPNPPGP----IVIDSKFPLEPYE 225
           E QL  ++ + L  D YA    +  ++  R +  I++PN        + ID+KFPLE Y+
Sbjct: 239 ETQLGALLEQLLTPDQYAVNVAVVPNSDARVEYAIHMPNGVDGAALWLPIDAKFPLEDYQ 298

Query: 226 ALRNAD---TQEQRASAARQLKAALRAHIRAISEKYILDGETADGALMFLPSEAVYAELH 282
            L+ A         A AA  L+  +R   + I  KY++   T D A++FLP+E ++AE+ 
Sbjct: 299 RLQEAQENANANAAADAANALERRVRDEAKRIRSKYVVPPHTVDFAILFLPTEGLFAEVL 358

Query: 283 AN---FSDIVREGFSAKVWIVSPTTCMATLNTMRAILKDARMREQAGAIRSELAHLHKDV 339
                F  + R+     + +  PTT  A L +++A  +   + +++  +   L  +  + 
Sbjct: 359 RRPGLFESLQRD---HHITVAGPTTLAAILTSLKAGFRTLAIEKRSSEVWQLLGAVKTEF 415

Query: 340 ERLGDRVGNLDRHFGMAAKDIAEIKISADKAGRRAQRLD 378
            + G  +  + ++   A+  I       D  G R + ++
Sbjct: 416 GKFGVVLDKVKKNLDQASNQI-------DATGARTRAIE 447