Pairwise Alignments

Query, 409 a.a., RmuC DNA recombination family protein from Phaeobacter inhibens DSM 17395

Subject, 490 a.a., DNA recombination protein RmuC from Pseudomonas fluorescens GW456-L13

 Score = 91.7 bits (226), Expect = 4e-23
 Identities = 86/345 (24%), Positives = 159/345 (46%), Gaps = 27/345 (7%)

Query: 34  RANARAVQSIAPIAQQMAHLGQSVQQLRGGVQHVSDAQANAQVQMIQTVETRLSAVQQQV 93
           R +A+A    A + +Q     Q +  L+G    +    A    ++    E R +   QQ 
Sbjct: 114 RLDAQAASLNAELREQQDSHQQRLNDLQGSRDELRAQFAELAGKIFDEREQRFAETSQQR 173

Query: 94  NDRLSDNALRQARALADMQERLQESLHGSTKRTVTSLTQLQERLAVIDKAQDNITKLSGD 153
             +L D    + ++    ++R++ES     +    SL +  ERL  ++       +LS +
Sbjct: 174 LGQLLDPLKERIQSF---EKRVEESYQNEARERF-SLAKELERLQQLN------LRLSDE 223

Query: 154 VLGLQDILANKQTRGAFGEIQLNDIVSKALPADSYAFQHTLS----NGKR--ADCLIYLP 207
              L   L  ++T+G +GE+ L  ++  A       +Q  ++    +G+R   D +IYLP
Sbjct: 224 ATNLTRALKGQKTQGNWGELILERVLEHAGLEKGREYQTQVNLKGPDGERFQPDVIIYLP 283

Query: 208 NPPGPIVIDSKFPLEPYEALRNADTQEQRASAARQLKAALRAHIRAISEKYI--LDG-ET 264
                +V+DSK  L  Y+    A+ +     A +Q   +LR H++ ++ K    LDG  +
Sbjct: 284 GDK-QVVVDSKVSLTAYQQYVAAEDEAIGQIAIKQHVLSLRNHVKGLAGKDYKRLDGLHS 342

Query: 265 ADGALMFLPSEAVYAELHANFSDIVREGFSAKVWIVSPTTCMATLNTMRAILKDAR---- 320
            D  L+F+P EA ++        + +E F   + IVSPTT +ATL  + ++ K  R    
Sbjct: 343 LDFVLLFVPIEAAFSAALQAEPTLFQEAFDRNIVIVSPTTLLATLRVIDSLWKQERQSQN 402

Query: 321 ---MREQAGAIRSELAHLHKDVERLGDRVGNLDRHFGMAAKDIAE 362
              + E+AG +  +     +D++ +G+R+  LD+ +  A   + E
Sbjct: 403 AREIAERAGWLYDKFVLFIQDLDEVGNRLQQLDKAYSSARNKLTE 447