Pairwise Alignments

Query, 1127 a.a., DNA polymerase III subunit alpha from Phaeobacter inhibens DSM 17395

Subject, 1026 a.a., error-prone DNA polymerase from Rhodanobacter sp000427505 FW510-R12

 Score =  820 bits (2118), Expect = 0.0
 Identities = 483/1068 (45%), Positives = 631/1068 (59%), Gaps = 64/1068 (5%)

Query: 27   DYAELCVTTNFTFLTGASHPEELIVRAAELGLSALAITDHNSLAGVVRAWSALKELKRDP 86
            DYAEL   ++F+F  GAS+  EL  RA   G SALAITD  SLAG+VRA+ A  E     
Sbjct: 3    DYAELHCLSDFSFGRGASNAAELFERARACGYSALAITDECSLAGIVRAYQASNETGLK- 61

Query: 87   QDALKIRSQHQVDSSSRQEIGHTSALPKPTTPIFPKLIVGCRLILQNCAVDWIALPCDRS 146
               L + ++ Q++                     PKL++ C                +R 
Sbjct: 62   ---LIVGAEFQLEDG-------------------PKLVLLCE---------------NRQ 84

Query: 147  AYKRLARLLTLGKRRAEKGQCLLYAEDMIDACKGMILIALPKETLSNAVSDIQKIGRQFP 206
             Y  L RL+T G+R + KG   L   D+     G + + +P      A    + I   F 
Sbjct: 85   GYAELCRLITRGRRASGKGTYRLTCADLESGMPGTLALWMPGLQADTAHG--RWIRATFG 142

Query: 207  NHVFLGATPRYDGSDQAYLAACAKLAQTTCAPMVAVGDVLMHRANRRQLADVLTCMRENI 266
            +  +L         D   L     L      P+ A GDV MH   R  L   LT +R  +
Sbjct: 143  DRAWLAVELHRGPDDVGRLCELQALGHALDLPLAASGDVHMHVRRRLALQHTLTAIRHRV 202

Query: 267  NIDDIGTRALPNAERRLKAGADMARIFRDHPAAL-RRTAEIANRCNFDLSELSYEYPHEE 325
             I + G     N ER L+    +A I+   PAAL + +  IA RC F + EL Y+YP E 
Sbjct: 203  PIAEAGALIFRNGERHLRRRDVLAGIY---PAALMQESVRIAERCTFHMGELKYDYPTEL 259

Query: 326  A-EGETPQDRLERLAREGLKRRYPDGPPDRAIKLMEKELSAVKDLEFPAYFLTVHDIVQF 384
              +G TP   L +LA EG++ R+P G   +  KL++ EL+ +   ++ A+FLTVHDIV+F
Sbjct: 260  VPDGHTPASWLRQLAEEGIRWRWPQGASAKVRKLIDDELALIASKQYEAFFLTVHDIVRF 319

Query: 385  ARSKGILCQGRGSAANSILCYLLGITDVSPDMIAMVFERFVSKHRGEPPDIDVDFEHERR 444
            AR +GILCQGRGSAANS +C+ LG+T+V P++  ++  RF+S+ R EPPDIDVDFEHERR
Sbjct: 320  ARGEGILCQGRGSAANSAVCFALGVTEVDPEVNHLLVARFISEDRDEPPDIDVDFEHERR 379

Query: 445  EEVIQWIYQKYGRHRAGLCATVIHFRTRAAIREVGKVMGLSQDVTAGLSGQI---WGMSN 501
            EEVIQ+IY KYGR RA L ATVI +R R+A+R+V K +GL  D    LS      WG S 
Sbjct: 380  EEVIQYIYGKYGRERAALAATVICYRGRSAVRDVAKALGLPLDQIDRLSDVFARGWGDSK 439

Query: 502  GSVDLERIRELGLNLEDRRLMQTIRLIGEIIGFPRHLSQHVGGFVITSGRLDELAPIENA 561
                 ER+RE G + +   + + ++L  E++G PRHLSQHVGGFVI+   L E+ P+ENA
Sbjct: 440  AD---ERLREQGFDPDSPIIRRVLKLTYELLGMPRHLSQHVGGFVISDTSLSEMVPVENA 496

Query: 562  AMENRTVICWDKDDIDALRILKVDILALGMLTCIRKAFALMQQHENITHSIATIPQKDEA 621
            AM +RTVI W+KDD+D +R+LKVD LALGMLTC+RK F L++    +  +IATI   D A
Sbjct: 497  AMPDRTVIQWEKDDLDYMRMLKVDCLALGMLTCLRKCFGLLESGHGVAKTIATIEPGDRA 556

Query: 622  TYDMLCAADAVGVFQVESRAQMNFLPRMRPREFYDLVIEVAIVRPGPIQGDMVRPYIRRR 681
            TY+M+  AD VGVFQ+ESRAQM  LPR RP  FYDLVI+VAIVRPGPIQGDMV PY+RRR
Sbjct: 557  TYEMIQRADTVGVFQIESRAQMAMLPRHRPANFYDLVIQVAIVRPGPIQGDMVHPYLRRR 616

Query: 682  NGLEKPDPFGPQLEQVTRRTKGVPLFQEQALQIAVVGAGFSAEEADHLRRSLASFRRMGT 741
            N  E  D   PQ + V  RT GVPLFQEQ +++A+V A F+  EAD LRRS+A+++R G 
Sbjct: 617  NKEEVVDYPSPQFKDVLERTLGVPLFQEQVMKLAIVAADFTDSEADKLRRSMAAWKRHGG 676

Query: 742  ISKYRDKFIAGMLKNKYSREIAERCFGQIEGFADYGFPESHAAAFAMLAYVSAWLKCHHP 801
            +  +RDK + GMLKN Y+   A R F QI+GF  YGFPESHAA+FA L Y S WLKCH+P
Sbjct: 677  LEPHRDKLMQGMLKNGYTAAFAARIFEQIKGFGSYGFPESHAASFANLVYASCWLKCHYP 736

Query: 802  AIFACALLNSQPMGFYAPAQIVRDVRDHGIEVRPICVNQSQWDNSLERRPDG---TLALR 858
            A FACALLN+QPMGFY P+QIV+DVR H + VRP+ V  S WD +LE  P G     A+R
Sbjct: 737  AAFACALLNAQPMGFYGPSQIVQDVRRHRVAVRPVDVRFSDWDCTLEPDPRGHADARAIR 796

Query: 859  LGFRQIKGFKEDDTGWIIAARG-NGYIDPEHLWLRAGLAPAALERLAEADAFSSMGISRR 917
            LG R ++G  E     ++AARG   + D   L  RAGL     E LA+A A   +   R 
Sbjct: 797  LGLRMVRGCSEAAALRLMAARGRQPFADVTDLCSRAGLDRRHQELLADAAALRGLAGHRH 856

Query: 918  DALWQVKSITTPAPLPLFNDQLDGEAINEPNVMLPRMHLGEEVVEDYVSMRLSLRAHPME 977
             A W V  +     LPLF  +  GE      V LP     E+ + DY  + LSL AHP+ 
Sbjct: 857  RARWAVAGV--EPQLPLFGSESPGERA----VALPLPTQAEDTLADYARVGLSLGAHPLR 910

Query: 978  LLRPTLPGLTCND--QLIKAP-LQRVSVGGLVITRQRPGTASGVIFLTLEDETGVCNVVV 1034
             +R  L    C D   L + P   RV V GLV +RQ+P TASG+IF+TLEDE G+ NV+V
Sbjct: 911  QIRARLNAAHCMDGKTLRRQPHHSRVRVAGLVTSRQQPQTASGIIFVTLEDEHGLINVIV 970

Query: 1035 WKKIYERFRRIVMGGRLLCVTGYLQREGTIVHVIAQHIEDESARLSEL 1082
             +++ E  RR ++  RLL V G  +    + H+IA  + D +  L  L
Sbjct: 971  RRQVAEAQRRALLQARLLAVEGQWENVDRVSHLIAHRLRDLTPLLGAL 1018