Pairwise Alignments

Query, 378 a.a., DNA polymerase IV from Phaeobacter inhibens DSM 17395

Subject, 353 a.a., DNA polymerase IV from Serratia liquefaciens MT49

 Score =  178 bits (452), Expect = 2e-49
 Identities = 122/352 (34%), Positives = 182/352 (51%), Gaps = 22/352 (6%)

Query: 1   MDCDAFYASVEKRDNPDLADKPVVIGGG--QRGVVSTACYVARIRGVRSAMPMFQALKLC 58
           +D D F+A+VE RD+P L D P+ IGG   +RGV+STA Y AR  GV SAM    ALKLC
Sbjct: 7   VDMDCFFAAVEMRDDPSLRDIPLAIGGSADRRGVISTANYPARRYGVHSAMSTAMALKLC 66

Query: 59  PDAVVIKPRMNVYVDVSRQIRAMMDELTPDVEPLSLDEAFMDLSGTQRLHGAPPAVMLAR 118
           P   ++  RM  Y + S  IR +    TP +EPLSLDEA++D++   + +G+  A ++A 
Sbjct: 67  PHLKLLPGRMAAYKEASLHIREIFARYTPLIEPLSLDEAYLDVTDCSQCNGS--ATLIAE 124

Query: 119 LVKR-MKDELGVTGSIGLSHNKFLAKVASDLDKPRGFSVIGAAETSEFLKDKPVRLIWGI 177
            +++ + DEL +T S G++  KFLAK+AS+L+KP G  VI  A+   FL+  P+  I G+
Sbjct: 125 QIRQAIADELNLTASAGVAPIKFLAKIASELNKPNGQYVITPAQVPAFLQQLPLSKIPGV 184

Query: 178 GPAAQASLDKAGIRSFSDLLRWDRTDLNARFGSMGERLWHLARGQDRRRVSSNAPIKSIS 237
           G      L++ G+ + +D+ ++D   L  RFG  G  LW   +G D R VS     KS+ 
Sbjct: 185 GKVTAKRLEEVGLITCADVQQYDLAALLKRFGKFGRVLWERCQGIDLREVSPERLRKSVG 244

Query: 238 NETTFFEDTASLEVLDGHLWRLAEKVSDRAKARQLAGRVVTLK--LKRANHSSLTRRQSL 295
            E T  ED         H W   E +       +L  R+  +K  L  A      + Q  
Sbjct: 245 VERTLAEDI--------HAWEECEALIVDKLYPELEMRLRKVKPDLHIARQGVKLKFQDF 296

Query: 296 RDATQ-------IADTVYRTARALLDQVGDEGPYRLLGCGISDLVPETQADI 340
           +  TQ         D +   AR    +  +    RL+G  ++ L P+ +  +
Sbjct: 297 QQTTQEHVWPVLNKDDLINVARQAWSERREGRGVRLVGLHVTLLDPQLERQL 348