Pairwise Alignments

Query, 378 a.a., DNA polymerase IV from Phaeobacter inhibens DSM 17395

Subject, 422 a.a., DNA polymerase IV from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  350 bits (898), Expect = e-101
 Identities = 188/379 (49%), Positives = 252/379 (66%), Gaps = 5/379 (1%)

Query: 1   MDCDAFYASVEKRDNPDLADKPVVIGGGQRGVVSTACYVARIRGVRSAMPMFQALKLCPD 60
           MDCDAFYASVEKRD P+L DKPV++GGG+RGVVSTACYVAR  GV SAMPMF+ALK CP+
Sbjct: 47  MDCDAFYASVEKRDRPELRDKPVIVGGGKRGVVSTACYVARQYGVGSAMPMFKALKACPE 106

Query: 61  AVVIKPRMNVYVDVSRQIRAMMDELTPDVEPLSLDEAFMDLSGTQRLHGAPPAVMLARLV 120
           AVVI+P    YV  S++I   + +LTP ++PLSLDEA++DLSGT+RL+G PPA+ L R  
Sbjct: 107 AVVIRPDFTKYVFESQRILGALGQLTPLIQPLSLDEAWVDLSGTERLNGGPPALQLIRFQ 166

Query: 121 KRMKDELGVTGSIGLSHNKFLAKVASDLDKPRGFSVIGAAETSEFLKDKPVRLIWGIGPA 180
           K++++E G+T SIGL+ N+FLAK+AS++DKPRGFSV+GAA     L  +PV  + G+GP 
Sbjct: 167 KQIEEETGLTVSIGLAPNRFLAKMASEMDKPRGFSVVGAANAQALLAPRPVTALPGVGPV 226

Query: 181 AQASLDKAGIRSFSDLLRWDRTDLNARFGSMGERLWHLARGQDRRRVSSNAPIKSISNET 240
              +L   G  +  DL R D  DL  R+G  G RL  LA  +D R V+     K +S ET
Sbjct: 227 FGKALRSDGYSTIGDLARADVRDLVKRYGESGLRLHDLAHARDARAVNPERDRKGMSAET 286

Query: 241 TFFEDTASLEVLDGHLWRLAEKVSDRAKARQLAGRVVTLKLKRANHSSLTRRQSLRDATQ 300
           TF ED  S E L+  LW L EK++ +A+   +A RV+ LKL+R +   +TRR +L D  Q
Sbjct: 287 TFNEDLTSAEALEAELWPLCEKLASKARRDGVASRVLVLKLRRTDFKIVTRRVTLPDPVQ 346

Query: 301 IADTVYRTARALL-DQVGDEGPYRLLGCGISDLVPETQADITGDLLDPQAGQRAKAERAT 359
            A  ++   R LL  ++G   PYRL+G G++D+  +   D    L      +  K ERA 
Sbjct: 347 TARALFAAGRDLLKPELG--RPYRLIGIGMADV--QDAEDAPAGLFQTSETRALKTERAI 402

Query: 360 DAIRERFGKSAIQKGRSLR 378
           D +RE+FGK A+  GR+L+
Sbjct: 403 DVLREKFGKDAVVAGRALK 421