Pairwise Alignments

Query, 899 a.a., chaperone protein ClpB from Phaeobacter inhibens DSM 17395

Subject, 857 a.a., ATP-dependent chaperone ClpB from Escherichia coli ECRC101

 Score =  952 bits (2462), Expect = 0.0
 Identities = 476/854 (55%), Positives = 633/854 (74%), Gaps = 1/854 (0%)

Query: 28  MDLNKFTERARGFVQAAQTIARREDHQRLMPEHLLKALMDDDQGLASNLITRAGGTPEQV 87
           M L++ T + +  +  AQ++A   D+Q + P HL+ AL++ + G  S L+T AG    Q+
Sbjct: 1   MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60

Query: 88  VQALELAVSKLPRVQGNSADIYLDGQTAKVLDEAAKIAEKAGDSFVPVERLLMALCMVKS 147
              +  A+++LP+V+G   D+       +VL+   K+A+K GD+F+  E  ++A    + 
Sbjct: 61  RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120

Query: 148 KAKDALADGNVSAQALNEAVNDIRKGRKADSASAEDGYDALKKYARDLTEAVRDGKIDPI 207
              D L     +   + +A+  +R G   +   AED   ALKKY  DLTE    GK+DP+
Sbjct: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180

Query: 208 IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGMALRIVNGDVPESLRDKQLLSL 267
           IGRDEEIRR +QVL RRTKNNPVLIGEPGVGKTAI EG+A RI+NG+VPE L+ +++L+L
Sbjct: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240

Query: 268 DMGALIAGAKYRGEFEERLKAVLTEVTEAAGEIILFIDEMHTLVGAGKSDGAMDAANLIK 327
           DMGAL+AGAKYRGEFEERLK VL ++ +  G +ILFIDE+HT+VGAGK+DGAMDA N++K
Sbjct: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300

Query: 328 PALARGELHCIGATTLDEYRKYVEKDAALARRFQPVMVTEPTVEDTISILRGIKEKYELH 387
           PALARGELHC+GATTLDEYR+Y+EKDAAL RRFQ V V EP+VEDTI+ILRG+KE+YELH
Sbjct: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360

Query: 388 HGVRIADAALVSAATLSHRYITDRFLPDKAIDLMDEAAARLRMQVDSKPEELDALDRQIL 447
           H V+I D A+V+AATLSHRYI DR LPDKAIDL+DEAA+ +RMQ+DSKPEELD LDR+I+
Sbjct: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420

Query: 448 QMQIEEEALKLEDDAASKDRLETLQKELAELQEKSAEMTAQWQSERDKLASARGLKEQLD 507
           Q+++E++AL  E D ASK RL+ L +EL++ + + +E+  +W++E+  L+  + +K +L+
Sbjct: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480

Query: 508 RARADLDAAKREGNLARAGELSYGVIPGLEKQLSEAEASERNGL-MVEEAVRPEQIAGVV 566
           +A+  ++ A+R G+LAR  EL YG IP LEKQL  A   E   + ++   V   +IA V+
Sbjct: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540

Query: 567 ERWTGIPTSKMLEGEREKLLRMEADLHGRVIGQDAAVTAVSNAVRRARAGLNDENRPLGS 626
            RWTGIP S+M+E EREKLLRME +LH RVIGQ+ AV AVSNA+RR+RAGL D NRP+GS
Sbjct: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600

Query: 627 FLFLGPTGVGKTELTKAVADFLFDDDSAMVRVDMSEFMEKHAVARLIGAPPGYVGYDEGG 686
           FLFLGPTGVGKTEL KA+A+F+FD D AMVR+DMSEFMEKH+V+RL+GAPPGYVGY+EGG
Sbjct: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660

Query: 687 VLTEAVRRKPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIILTSNL 746
            LTEAVRR+PY VIL DEVEKAHPDVFN+LLQVLDDG LTDGQGRTVDF+ T++I+TSNL
Sbjct: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720

Query: 747 GAQALSQLPDGADAADAKRDVMDAVRAHFRPEFLNRLDETIIFDRLGRKDMDGIVTLQLA 806
           G+  + +     D A  K  V+  V  +FRPEF+NR+DE ++F  LG + +  I  +QL 
Sbjct: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780

Query: 807 RLEKRLVGRKITLELDDGAKTWLADEGYDPVFGARPLKRVIQRVLQNPLAEMLLAGEIRD 866
           RL KRL  R   + + D A   L++ GYDPV+GARPLKR IQ+ ++NPLA+ +L+GE+  
Sbjct: 781 RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP 840

Query: 867 GDTVPVSAGAEGLI 880
           G  + +    + ++
Sbjct: 841 GKVIRLEVNEDRIV 854