Pairwise Alignments

Query, 675 a.a., penicillin-binding protein PbpC from Phaeobacter inhibens DSM 17395

Subject, 755 a.a., penicillin-binding protein 1C from Variovorax sp. OAS795

 Score =  227 bits (578), Expect = 2e-63
 Identities = 204/630 (32%), Positives = 276/630 (43%), Gaps = 75/630 (11%)

Query: 17  AWVEKTPMPATLAE----------TATELRDRNGQLLRAY----PVADGIWRMATTVDQV 62
           AWV+  P  A +            + T + DRNG+LL+       V  G W   T +  V
Sbjct: 21  AWVQPAPASAGVVSFDEVKREFRSSDTAVLDRNGELLQRVRTDATVRRGQW---TALADV 77

Query: 63  DAGYRAMLLRYEDKRFYDHSGVDVLALLRAAAQALWRGRVVSGGSTLSMQVARLLED--- 119
               R  ++  ED+RFY+HSG+D  A+  AA   LW  R   G ST++MQ++ LL++   
Sbjct: 78  SPALRMAMVMSEDRRFYEHSGIDWRAVSAAAWGNLWNTRT-RGASTITMQLSGLLDEDLR 136

Query: 120 -GSTGR-WAGKLRQIRLALALERRLSKAQILELYLIHAPFGGNIEGVRAASYAWFGKEPS 177
             ++GR +  K+ Q   A  LER   K QILE YL   PF G I G+ A S   FGK P+
Sbjct: 137 RANSGRTFTQKIGQTVAAAQLERSWRKDQILEAYLNTVPFRGEIVGIDALSRTLFGKAPN 196

Query: 178 RLTPAEAALLVALPQAPEAR---------RPDRMPEDARRARNRVLQRMRNAGVL--AAD 226
            L   EA++  AL +AP A+            R  E  R+     L    +A V   A D
Sbjct: 197 GLDAREASVAAALVRAPNAKPALVAQRACEVMRAMEPERKIDCEALDMFTSAAVQRRAFD 256

Query: 227 AAETAAQAPMPRGMRVFPQLAPHLADYLVAETPEQARIDLTLEAGLQQRLAQLLTESVAR 286
           A E  A     R +R   + A   A   V    + A  D  +   L+  L +    ++ R
Sbjct: 257 ANEGIAPHAARRALRELRE-AGEAAGAAVPSARQVANKDAAIRTTLRAPLQRFALGTLQR 315

Query: 287 QDARL------SAAVLVADHQSGEILASVGSSGYRDDLRQGFVDMTRAPRSPGSTLKPLV 340
               L        A++V D+ SGE+LA VGSSG      +  VD   A R PGSTLKPL+
Sbjct: 316 HLKELRGRHVEDGALVVLDNASGEVLAWVGSSGPLSQAAE--VDAVTALRQPGSTLKPLL 373

Query: 341 YGLAFDQGLAHPETLIHDGPIDIDG----YAPQNFDGRFRGDLRIRRALQLSLNTPVIQL 396
           Y  A  +      +LI D    I+     Y PQN+D +F+G +  R AL  SLN P ++ 
Sbjct: 374 YAQAIAERRLTAASLIDDSSAQINTASGLYIPQNYDRQFKGPVSARTALAASLNVPAVRT 433

Query: 397 TQALGPARLMSALRRGGARPRLPGGKPGLAVALGGVGVSLRDLVQVYAGLGAGGQ-GPRL 455
              + P      LR  G   R  G   G ++ALG   VSL  L   Y  L  GG+ GP  
Sbjct: 434 LVMVSPESFARQLRAAGLPLRESGDYYGYSLALGSAEVSLLSLTNAYRMLANGGRYGP-- 491

Query: 456 RARLQAP-------YERMPRLMSKVSAWQIGDILRGVPPPAG--------APAGMVAYKT 500
              L AP        +    ++   +A+ +GDIL                +     A KT
Sbjct: 492 -TTLSAPTPAGKKAVDPAASILDAGAAFIVGDILSDANARTRTFGLDSILSTRFWTAVKT 550

Query: 501 GTSYGHRDTWAIGWDGRYVVGVWLGRADGTPVPGAFGAELAAPLLFEAFGRI-GRGFTPF 559
           GTS   RD WA+GW  RY VGVW+G A G  +    G   AAP+  E    +  R  +  
Sbjct: 551 GTSKDMRDNWAVGWSQRYTVGVWVGNASGASMWDVSGTSGAAPVWAEVMRFLHAREPSRA 610

Query: 560 PASPASTLRVATAELPLPLQRFDRGGIGGP 589
           P  P   +    A        F  GG G P
Sbjct: 611 PRPPPGLVEARVA--------FGPGGDGNP 632