Pairwise Alignments

Query, 675 a.a., penicillin-binding protein PbpC from Phaeobacter inhibens DSM 17395

Subject, 770 a.a., penicillin-insensitive murein repair transglycosylase; inactive transpeptidase domain protein from Escherichia coli BL21

 Score =  405 bits (1042), Expect = e-117
 Identities = 234/528 (44%), Positives = 307/528 (58%), Gaps = 8/528 (1%)

Query: 23  PMPATLAETATELRDRNGQLLRAYPVADGIWRMATTVDQVDAGYRAMLLRYEDKRFYDHS 82
           P+P      A  +  ++G  L  +  ADGIWR   T++ V   Y   L+ YED+ F+ H 
Sbjct: 33  PLPLHEVNPARVVVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHP 92

Query: 83  GVDVLALLRAAAQALWRGRVVSGGSTLSMQVARLLEDGSTGRWAGKLRQIRLALALERRL 142
           GV+  ++ RAA Q L  GRV+SGGSTL+MQVARLL D     + GK+RQ+  AL LE  L
Sbjct: 93  GVNPFSVARAAWQDLTSGRVISGGSTLTMQVARLL-DPHPKTFGGKIRQLWRALQLEWHL 151

Query: 143 SKAQILELYLIHAPFGGNIEGVRAASYAWFGKEPSRLTPAEAALLVALPQAPEARRPDRM 202
           SK +IL LYL  APFGG ++G+ AAS+A+ GK P+ L+ +EAA+L  LPQAP   RPDR 
Sbjct: 152 SKREILTLYLNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRW 211

Query: 203 PEDARRARNRVLQRMRNAGVLAADAAETAAQAPMPRGMRVFPQLAPHLADYLVAETPEQA 262
           PE A  ARN+VL+RM   GV + +  + + + P+    R  PQLAP  +  ++ ++    
Sbjct: 212 PERAEAARNKVLERMAVQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSD- 270

Query: 263 RIDLTLEAGLQQRLAQLLTESVARQDARLSAAVLVADHQSGEILASVGSSGYRDDLRQGF 322
           +I  TL+AGLQ+RL +L      R   R S A++V DH    +   VGS    DD R G 
Sbjct: 271 KITTTLDAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGH 330

Query: 323 VDMTRAPRSPGSTLKPLVYGLAFDQGLAHPETLIHDGPIDIDGYAPQNFDGRFRGDLRIR 382
           VDM  + RSPGS LKP VYGLA D+GL HP +L+ D P     Y P NFD  F G + + 
Sbjct: 331 VDMVNSIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMS 390

Query: 383 RALQLSLNTPVIQLTQALGPARLMSALRRGGARPRLP-GGKPGLAVALGGVGVSLRDLVQ 441
            AL  SLN P +Q+ +A GP R  + LR  G    LP G  P L++ LGG G  L D+  
Sbjct: 391 EALVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAA 450

Query: 442 VYAGLGAGGQGPRLRARLQAPYERMPRLMSKVSAWQI----GDILRGVPPPAGAPAGMVA 497
            Y      G+  +LR +   P    P LMS  +AW I     D  + +P  A      +A
Sbjct: 451 AYTAFARHGKAGKLRLQPDDPLLERP-LMSSGAAWIIRRIMADEAQPLPDSALPRVAPLA 509

Query: 498 YKTGTSYGHRDTWAIGWDGRYVVGVWLGRADGTPVPGAFGAELAAPLL 545
           +KTGTSYG+RD WAIG + RYV+G+W GR DGTPV G FG   A PLL
Sbjct: 510 WKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFASAVPLL 557