Pairwise Alignments

Query, 258 a.a., branched-chain amino acid transport system ATP-binding protein from Phaeobacter inhibens DSM 17395

Subject, 255 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Escherichia fergusonii Becca

 Score =  160 bits (406), Expect = 2e-44
 Identities = 86/253 (33%), Positives = 146/253 (57%), Gaps = 5/253 (1%)

Query: 1   MTAPLLTTDDLTVRFGGHVAVDAVTCAFHAGELTAIVGPNGAGKTTYFNLISGQIPASAG 60
           M+ PLL+ + L +RFGG +AV+ V    +  E+ +++GPNGAGKTT FN ++G    + G
Sbjct: 1   MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGG 60

Query: 61  RVTLNGQDISAASVSARTKAGIGRAFQMTNLFPDLTVLENVRLVVQAKARRGFNLWSVVT 120
            + L  Q +         + G+ R FQ   LF ++TV+EN+ +    + + G     + T
Sbjct: 61  TILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKT 120

Query: 121 -----GHTDLMDQAEEILARVRLLDERNQIVSELSHGNQRKLEVALLIALDPLIYMFDEP 175
                  ++ +D+A   L R+ LL+  N+  S L++G+QR+LE+A  +   P I M DEP
Sbjct: 121 PSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEP 180

Query: 176 TAGMSVDEAPVVLDLIADLKAQTDRTVLLVEHKMDVIRTLADRIIVLHNGALAADGAPAE 235
            AG++  E   + +LIA+L+ + + T+LL+EH M ++  ++DRI V++ G   A+G P +
Sbjct: 181 AAGLNPKETKELDELIAELRNRHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQ 240

Query: 236 VMASDIVQEAYMG 248
           +  +  V  AY+G
Sbjct: 241 IRNNPDVIRAYLG 253