Pairwise Alignments

Query, 457 a.a., putative phage integrase from Phaeobacter inhibens DSM 17395

Subject, 388 a.a., tyrosine-type recombinase/integrase from Serratia liquefaciens MT49

 Score = 47.8 bits (112), Expect = 6e-10
 Identities = 90/397 (22%), Positives = 152/397 (38%), Gaps = 55/397 (13%)

Query: 21  RLTNQYVQNLKPSCKRQTISDDVSQGLSLRVGVSGTKTWSYMGRDCHGKSRTETIGRYPD 80
           +L  + V+  KP  K   ++D    GL L V  SG K W +      G+ +   IG YP 
Sbjct: 2   KLNARQVETAKPKDKDYKMTD--GNGLFLLVKNSGAKYWRFRYTFA-GREKMLAIGVYPA 58

Query: 81  VSLKAARQKADQLRQVFASEEMLASYLKPPAIVEQITLFELLLEAECKFRATKKIWQPRG 140
           +SL  AR K D+ R+  A+ E        P IV+              F+     W    
Sbjct: 59  ISLSVARDKRDEARRCVAAGE-------DPVIVKN----RGTATKAATFKEIANEWHEFK 107

Query: 141 KTSDASTARQVITTVFGPVLHRPAIELTAEKASALLQSYKPKSKERTGKKTANGQASKAL 200
           K   ++   + I   F   ++    +L   +   +      +  E  G   A  +ASK  
Sbjct: 108 KPGWSAVYAEDILEAFEKDIYPVVGKLPVSEIEPIQMLAALRVIENRG---ATEKASKTR 164

Query: 201 SYLRTVFNWASNRTPRFQKIGAGRTPAILLSDFSVIHDPSIDDPTITGERDRVLFVEELR 260
            +   VF +A         +  GR      + ++ + +         G+    L  EEL 
Sbjct: 165 RWCGEVFGYA---------VATGR------AKYNPVSELGKAMKGHKGKSFPFLEAEEL- 208

Query: 261 CILPHLKVPETTSA--EWWKVDLRPVAQRFMLLTLARREEVEAARRRDVDIEQKSW---T 315
                   PE  SA   +    L  +  + M+L   R  E+  ++   VD +   W    
Sbjct: 209 --------PEFLSAVDGYLGSPLPKLGVKIMMLAGLRTRELRYSKWDWVDFDNALWEIPA 260

Query: 316 KRVKGGHQVTHPLSDAAITLLKELPGFASREDDDLLFPNQELGPLGNWNRSKEKLQDVSN 375
           + +K G     PLS   ++LLKEL     R ++  +FP + + P  N   S+  +  + +
Sbjct: 261 EFMKKGRPHLVPLSRQLVSLLKELYALTGRFEN--MFPGR-VNP--NKVMSESTINRMIH 315

Query: 376 IENWH----RHDLRRTGATILSLMGVPAQVVDTMLSH 408
           +  +      H  R T +TIL+  G  +  V+  ++H
Sbjct: 316 LIGYKDRVVGHGFRHTFSTILNDKGFNSDWVELQIAH 352