Pairwise Alignments

Query, 457 a.a., putative phage integrase from Phaeobacter inhibens DSM 17395

Subject, 411 a.a., integrase from Escherichia coli ECOR38

 Score = 58.2 bits (139), Expect = 5e-13
 Identities = 88/401 (21%), Positives = 151/401 (37%), Gaps = 71/401 (17%)

Query: 31  KPSCKRQTISDDVSQGLSLRVGVSGTKTWSYMGRDCHGKSRTE--TIGRYPDVSLKAARQ 88
           KP  K+ TI+D   +GLS+RV   G  ++ +  R   G++     T+G+YPD+SLK AR+
Sbjct: 18  KPREKQITIAD--GKGLSIRVSTKGAVSFVFFYRLAGGRAAPVWLTLGKYPDMSLKQARE 75

Query: 89  KADQLRQVFASEE--------MLASYLKPPAIVEQITLFELLLEAECKFRATKKIWQPRG 140
           K D+ R   A +              LKP  + + +  +    E  CK R          
Sbjct: 76  KRDECRGWLADKRDPRIQIKIQAEERLKPVTVEDALNYW---YENYCKVR---------- 122

Query: 141 KTSDASTARQVITTVFGPVLHRPAIELTAEKASALLQSYKPKSKERTGKKTANGQASKAL 200
           + + A T  +    +F  + H P  +    +        K  +        ++ + +   
Sbjct: 123 RKTHAVTLGRFRKHIFPYIGHLPVNDTHLYEWLDCFDRIKRNAPVMAAYVFSDTKLALRF 182

Query: 201 SYLRTVFNWASNRTPRFQKIGAGRTPAILLSDFSVIHDPSIDDPTITGERDRVLFVEELR 260
             +R      + +  R   +G                        I G+RDRVL   EL 
Sbjct: 183 CRVRQYATCDALKDLRMSDVG-----------------------QIAGKRDRVLDEAELG 219

Query: 261 CILPHLKVPETTSAEWWKVDLRPVAQRFMLLTL--ARREEVEAARRRDVDIEQKSWTKRV 318
            +   + V         K+      + F+L T+   R  E   +   + D+E   WT   
Sbjct: 220 QLWKAIFVEPDL-----KLMSEYTRKMFVLCTVFGCRMSEARLSEWSEWDLESWVWT--- 271

Query: 319 KGGHQVTHPLSDAAITLLKELPGFASREDDDLLFPNQELGPLGNWNRSKEKLQDV----- 373
                V    S   + +++ +P    +   D+    +  G +    R +E +  +     
Sbjct: 272 -----VPKDHSKTGVEIVRPVPEILRQWVTDVHEETKHTGYVLGSLRIRESVSKIGGKIG 326

Query: 374 ---SNIENWHRHDLRRTGATILSLMGVPAQVVDTMLSHKNP 411
               + + W  HDLRRT +T LS +GV   VV+ +L H  P
Sbjct: 327 KRLGHEKQWSLHDLRRTLSTHLSDLGVEFYVVEQLLGHALP 367