Pairwise Alignments

Query, 368 a.a., ABC transporter permease protein from Phaeobacter inhibens DSM 17395

Subject, 381 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

 Score =  397 bits (1020), Expect = e-115
 Identities = 206/389 (52%), Positives = 254/389 (65%), Gaps = 54/389 (13%)

Query: 4   SPLNQRRWSNFCRNRRAFWSLWIFSVLFGISLFAEFVANDKPMLVSYRGEYFTPVFNFYP 63
           SP  +RRW NF  NRR +WS W+F +LF +SL AEF+ANDKP+L SY+GE   PV   YP
Sbjct: 21  SPTTKRRWQNFKANRRGYWSFWLFLILFFLSLIAEFIANDKPILASYKGEILVPVMVDYP 80

Query: 64  ETAFGGDFQTEAAYRDPEVQCLIASGGVEDCFDDPEGILEEIETGTFAAEGFVEGWAIWP 123
           E  FGG F  +  Y+   +Q                   +EI            GW IWP
Sbjct: 81  EEKFGG-FLAQTDYKSSFIQ-------------------DEINAN---------GWMIWP 111

Query: 124 PIPYSFNTTVDR-PGAAPLPP------------------------NGQNLLGTDDTKRDV 158
           PI YS+ T     P +AP  P                           N LGTD+  RDV
Sbjct: 112 PIRYSYQTVNSNIPHSAPTAPFWLMDEKERCSAYPQGNADPGCTLGNLNWLGTDNQARDV 171

Query: 159 LARVIHGFRLSILFTLMVTGAATLVGIAAGAVQGFFGGWLDLIFQRVIEIWGSIPQLYVI 218
            AR+I+GFR+S+LF L +T A+ LVG+ AGA+QG+FGGW DL+ QR IEIW S+P LY++
Sbjct: 172 TARMIYGFRISVLFGLTLTIASALVGVTAGAIQGYFGGWTDLLLQRFIEIWSSMPVLYIL 231

Query: 219 IIMFAILGRSFWLLVVLMILFSWTALVSVVRAEFLRARNLEYVRAAKALGVGNMTIMFRH 278
           +I+ AIL   F++L+ +M+LFSW   V +VRAEFLRARN EYVRAA+ALGVGN TIMFRH
Sbjct: 232 LIIAAILPPGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVGNWTIMFRH 291

Query: 279 MLPNAMVATLTFLPFIVTGTIGTLAGLDFLGFGLPSSAPSLGELTLQAKQNLEAPWLAFT 338
           +LPNAMVATLTFLPFI++G+I TL  LDFLGFG+P  +PSLGE+  Q K NL+APWL  T
Sbjct: 292 LLPNAMVATLTFLPFILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKNNLQAPWLGLT 351

Query: 339 AFFTFAIMLSLLVFIFEGVRDAFDPRKTF 367
           AFFT +IMLSLL+F+ E VRDAFDPRKTF
Sbjct: 352 AFFTMSIMLSLLIFVGEAVRDAFDPRKTF 380