Pairwise Alignments

Query, 289 a.a., integral membrane protein PecM from Phaeobacter inhibens DSM 17395

Subject, 309 a.a., ABC transporter permease from Ralstonia solanacearum PSI07

 Score =  225 bits (574), Expect = 8e-64
 Identities = 138/281 (49%), Positives = 174/281 (61%), Gaps = 8/281 (2%)

Query: 6   LILTALAPMIWGSSYIVTTTLLPGQSPLLVALLRALPAGLLLMLMVRQLPPLNWVPRLLV 65
           ++ TALAP +WG++YIV T  LP   PLLV  LRALPAG+LLML+   LPP + + RL +
Sbjct: 9   ILATALAPCLWGTTYIVFTQTLPVSHPLLVGALRALPAGVLLMLLGPALPPRDKLGRLAL 68

Query: 66  LGALNFSIFWSLLFVAAYRLPGGVAATLGAVQPLVVVFLSALMLKTPVRTAAVLAAGLSI 125
           +G  N  +F++LLFVAA RLPGGVAAT+ +VQPL+V  L   +L    R A + AA    
Sbjct: 69  VGLANIGVFFALLFVAAARLPGGVAATVMSVQPLIVGLLVWPVLGRRPRPAQLAAALAGS 128

Query: 126 LGVALLVLTPSAQLDGIGVFAGLAGAIAMAAGVVLSRKWQPPVSLLTFTAWQLTAGGLLL 185
           LGV LL+L P+A+LD IGV A L  A++MA G VL  +W    + L   AWQL  GGL+L
Sbjct: 129 LGVGLLILGPAARLDAIGVAAALGAAVSMATGTVLIERWGRVGTPLALAAWQLALGGLVL 188

Query: 186 IPVTL--WSLPAFPQLSAENLLGLAYMSLIGGAATYVLWFRGIARLEPSVVSLLGVLSPL 243
           +PV L    LP  P L   N  G  Y+ +IG A  Y LW RGI RL    V+ L +LSPL
Sbjct: 189 LPVALAVEGLPPVPTL--RNAAGFVYLVVIGTALGYWLWVRGIGRLGAD-VTFLSLLSPL 245

Query: 244 SAVVLGWVFLGEVLTAKQATGAGLALFSLWLGQSGLRWRRR 284
           +A VLG V LGE  +  Q  GA L L +     SG+ W RR
Sbjct: 246 TATVLGAVLLGEWFSPVQTAGALLILAAT---VSGMAWSRR 283