Pairwise Alignments

Query, 338 a.a., putative sugar transport system, periplasmic protein from Phaeobacter inhibens DSM 17395

Subject, 295 a.a., ribose ABC transporter substrate-binding protein RbsB from Serratia liquefaciens MT49

 Score =  108 bits (269), Expect = 2e-28
 Identities = 90/304 (29%), Positives = 149/304 (49%), Gaps = 22/304 (7%)

Query: 1   MKKL-LLGTAIGFAAMTGSAFAAEGVTACLITKTDTNPFFVKMKEGAEAKAAELGMTLKS 59
           MKKL +L +A   +A T SA A    T  L+  T  NPFFV MKEGA+ +A +LG  L  
Sbjct: 3   MKKLAILASAFALSA-TLSANALAKDTIALVVSTLNNPFFVSMKEGAQQEANKLGYNLVV 61

Query: 60  FAGKVDGDHETQVAAIETCIADGAKGILLTASDTSSIVPAVQQARDAGLVVIALDTPLEP 119
              +   +   ++A ++  +    K +L+  +D+ ++  A++ A  A + VI LD     
Sbjct: 62  LDSQ--NNPAKELANVQDLMVQAPKLLLINPTDSDAVGNAIKMANQAKIPVITLDRVASK 119

Query: 120 IDSADATFATDNFLAGELIGKWAAASLGDEAANAKIAMLDLAVSQPTVGVLRDQGFLQGF 179
            D   +  A+DN + G++ G + A  +G   A+AK+  L+  ++  +    R +GF Q  
Sbjct: 120 GDVV-SHIASDNRVGGKMAGDFIAKKVG---ADAKVIQLE-GIAGTSAARERGEGFKQSL 174

Query: 180 GIDLGDPNKWGDETDPRIVGNDITAGNEEGGRRAMENLLAKDPMINVVYTINEPAAAGAY 239
                D NK+      +++ +     +   G   M+NLL   P +  V+  N+  A GA 
Sbjct: 175 -----DQNKF------KLLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGAL 223

Query: 240 EALKSIGRENDVLIVSVDGGCPGVQNIKDGVIGATSQQYPLLMASKGIEAISAWATTGEK 299
            AL++ G+  DV++V  DG   GV+ ++ G + AT  Q P  +   G+E        GEK
Sbjct: 224 RALQTAGK-TDVVVVGFDGTADGVKAVEGGKLAATVAQRPDQIGVIGVETADK-VLKGEK 281

Query: 300 PAPT 303
            + T
Sbjct: 282 VSAT 285