Pairwise Alignments

Query, 629 a.a., uvrABC system protein C from Phaeobacter inhibens DSM 17395

Subject, 610 a.a., excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) from Escherichia coli BW25113

 Score =  424 bits (1089), Expect = e-123
 Identities = 235/607 (38%), Positives = 361/607 (59%), Gaps = 22/607 (3%)

Query: 27  YLKTLDSSPGVYRMLDSESRVLYVGKARNLRARVSNYSRPGHSPR-IERMIAATASMMFL 85
           +LKT+ S PGVYRM D+   V+YVGKA++L+ R+S+Y R   + R  E ++A    +   
Sbjct: 10  FLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVT 69

Query: 86  TTRTETEALLLEQNLIKQLKPKYNVLLRDDKSFPNILVAKDHAFPQIKKHRGTRREKGSY 145
            T TETEALLLE N IK  +P+YNVLLRDDKS+P I ++ D   P++  HRG +  KG Y
Sbjct: 70  VTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGD-THPRLAMHRGAKHAKGEY 128

Query: 146 FGPFASAGAVNRTLNQLQKAFLLRNCTNAMFESRTRPCLQYQIKRCTAPCT-GEISAEDY 204
           FGPF +  AV  TL  LQK F +R C N+++ +R+RPCLQYQI RC  PC  G +S E+Y
Sbjct: 129 FGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVSEEEY 188

Query: 205 ASSVRDAERFLSGRSTKIQEELAEQMAAASEAMEFERAAALRDRIKALTQVQTSQGINPR 264
           A  V     FLSG+  ++  +L  +M  AS+ +EFE AA +RD+I+A+ +V   Q ++  
Sbjct: 189 AQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVTEKQFVSNT 248

Query: 265 GVAEADVIGLHLDSGQACVQVFFIRANQNWGNQDFYPRINGDVSPAEVMEAFIGQFY--- 321
           G  + DVIG+  D+G ACV V FIR  +  G++ ++P++ G    +EV+E F+GQFY   
Sbjct: 249 G-DDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQG 307

Query: 322 -DNKEPPRQLILSDEIENGDLMEQALSDKAGRRVEILVPQRGEKTELVAGAVRNARESLA 380
              +  P +++L   + +  L+  +LS+ AGR++ +    RG++   +  A  NA  +L 
Sbjct: 308 SQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALT 367

Query: 381 RRMAESATQAKLLRGVAEAFGLEGPPQRIEVYDNSHIQGSHAVGGMIVAGPEGFMKNAYR 440
            ++++ +T  + L  +A    L    +R+E +D SH  G   V   +V    G ++  YR
Sbjct: 368 SKLSQQSTVHQRLTALASVLKLP-EVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYR 426

Query: 441 KFNIRGDDLTPGDDFGMMKEVLNRRFSRLLKEDPDREKGLWPDLLLIDGGAGQVSAVAEI 500
           ++NI G  +TPGDD+  M +VL RR+ + + +         PD++LIDGG GQ++    +
Sbjct: 427 RYNITG--ITPGDDYAAMNQVLRRRYGKAIDDSK------IPDVILIDGGKGQLAQAKNV 478

Query: 501 MAEHGV---QDIP-MIGVAKGVDRDHGKEE-FHRLGAPAFALQRNDPVLYFVQRMRDEAH 555
            AE  V   ++ P ++GVAKG DR  G E  F       F+L  + P L+ +Q +RDE+H
Sbjct: 479 FAELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESH 538

Query: 556 RFAIGTHRAKRAKAMGATPLDEVPGVGAARKRALLAHFGSAKAVSRANLSDLKAVEGVSA 615
             AIG HR KRAK    + L+ + GVG  R++ LL + G  + +  A++ ++  V G+S 
Sbjct: 539 DHAIGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQ 598

Query: 616 ALAQRIY 622
            LA++I+
Sbjct: 599 GLAEKIF 605