Pairwise Alignments

Query, 290 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

Subject, 297 a.a., helix-turn-helix domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score =  149 bits (375), Expect = 1e-40
 Identities = 95/287 (33%), Positives = 144/287 (50%), Gaps = 13/287 (4%)

Query: 5   KAITTYSLFGENTELA--DLLHIESIEARSSLHDWSLTPHRHARLHQLLTLTHGGGLATL 62
           + I  Y L+GE+      D  + E I  RS  +DW +  HRH  L Q+L +  G G   +
Sbjct: 2   RKIPNYDLYGESARPPWFDAFNFEWIAERSRPNDWHIAAHRHDALLQILYIRSGSGHVVI 61

Query: 63  DGNEQDLHPPCMVNVPRGVVHGFQFSSDTRGWVLTLTSDLMDQVL-GDSLGILTTLDRAA 121
           +  +    PPC+V +P   VHGF FS D  G V+T     ++ +    S G+L  + R  
Sbjct: 62  ESEKHAFTPPCVVVLPAQTVHGFVFSPDIDGLVITAAQRALESISKAVSPGLLPVIQRPG 121

Query: 122 VTPLR-----DELLQLLTAIRDAYDADGFARTPILRGLVGAITGTVAQCIGAQ----QSR 172
           V P++     D L+ L T +   Y  +          L+ A+   VA+   A      S 
Sbjct: 122 VIPVKTPAGDDTLMPLFTLLEQEYRGNARGHIAAGMSLMIALFVQVARLSDAAAMTASSG 181

Query: 173 DANPKAHQLFARFETLVNRDFRARRQVSDYARELAVSTTHLNRISHQATGQSASQLINER 232
            A+ ++ Q+  RF  LV   FR  R V  YA +L ++T  L+RI     G S   L+NE 
Sbjct: 182 VADRRSVQI-KRFRELVAGHFREHRPVDFYAEKLGITTAQLSRICRDELGHSPMSLVNEH 240

Query: 233 MLREARRLLIYTSMSAAQIAYELGYADPAHFSRVFARGTGLPPRRFR 279
           ++REA+R L+Y+ ++  QIA+ LG+ D A+FSR F + TG  P+ F+
Sbjct: 241 LIREAQRDLVYSGLTIKQIAHALGFEDAAYFSRYFRKQTGATPKEFQ 287