Pairwise Alignments

Query, 433 a.a., sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Phaeobacter inhibens DSM 17395

Subject, 435 a.a., ABC transporter substrate-binding protein from Pectobacterium carotovorum WPP14

 Score =  109 bits (273), Expect = 1e-28
 Identities = 106/410 (25%), Positives = 174/410 (42%), Gaps = 39/410 (9%)

Query: 33  GALGDTVNQIASDFNASQDEYKITPVFKGTYEETLTAGIAAFRAGEQPNVMQVFDAGAAT 92
           G L   + +I  ++N SQD+ ++  +F G Y+ T     AA +AG+ P ++ +  A    
Sbjct: 35  GKLTMEMTRIIKEYNQSQDQVEVRGIFTGNYDTTKVKAEAAAKAGDPPALV-IMSANFTA 93

Query: 93  VIGAKGATIPVQDLLA---DNGVDFDINDYIAGVRYFYADSDGKMIGMPFNSSTPIMYYN 149
            +  K   +P+ +L     +    F   ++   +    A   G    +PF++STPI+YYN
Sbjct: 94  DLVIKDEILPMDELFKYGNEKATPFLTKNFWPALHQ-NAQVMGVTYAIPFHNSTPILYYN 152

Query: 150 IQALEKAGVTAP-KTWEEFQTV----TAPALKEAGYTALSQSHLPWIFTENFHSRHNLPF 204
              L+KAG   P K W+E   V    T PA  + G    S        T + +    L  
Sbjct: 153 EDMLKKAGFNEPPKNWDEVIAVAKKLTDPAKGQWGIMIPS--------TNDDYGGWMLSA 204

Query: 205 ATNNNG--YDSVDT--QILVNNDAIKAHFTAVTDWQEKGHFEWFGTGWGDNQ----TPFE 256
            T  NG  Y + D   ++  N  + K    A+  W++  + +        N       F 
Sbjct: 205 LTRANGGAYYNADYPGEVYYNTASTKG---ALQFWRDLVYRDKVMPAGVLNSKQISAAFF 261

Query: 257 EGKVAMWLGSSGSFGGLSKKNLPFDFSATMLPYWEGVTKEPTQTFIGGASLFAMAGHDAE 316
            GK+ M + S+G+ G + +    F     M+P      KE     IGGASL +  G   +
Sbjct: 262 SGKLGMTMLSTGALGFMRENTKDFQLGVAMMP-----EKERRGVTIGGASLVSFKGISED 316

Query: 317 ENKATAAFFDFLTSSEVQYFWHKETGYVPITEAAYEMAKADGHYDRAPAAEVGIQQLSLP 376
           + KA   F ++L S EV   W + TGY     AAY++ +   +  + P A + + QL   
Sbjct: 317 QKKAAWQFMNYLVSPEVSGNWSRFTGYFAPRMAAYDLPEMKDYLAKDPRAAIALSQLQYA 376

Query: 377 GGDNTKGYRMGFYVQIRDVMNREYGRILTGET-SVEDAFNAIEAEANNLL 425
                  Y     V +R  M  +   +L      V+DA  A + EA+ ++
Sbjct: 377 ----HPWYATYETVAVRKAMENQLAALLNDPAKKVDDAAAAAQKEADGIM 422