Pairwise Alignments

Query, 433 a.a., sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Phaeobacter inhibens DSM 17395

Subject, 430 a.a., carbohydrate ABC transporter substrate-binding protein from Dickeya dianthicola 67-19

 Score = 47.8 bits (112), Expect = 7e-10
 Identities = 96/461 (20%), Positives = 165/461 (35%), Gaps = 63/461 (13%)

Query: 1   MKRIAFTT--AATLAFAANAAYA----ETEITWWHAMGGALGDTVNQIASD-FNASQDEY 53
           MK++   T  A++LA  A+ ++A    E  ++WW   GG     V   A D F       
Sbjct: 1   MKKVILRTLIASSLALMAHQSFAADQVELRMSWW---GGNGRHQVTLKAIDAFQKQYPNI 57

Query: 54  KITPVFKGTYEETLTAGIAAFRAGEQPNVMQVFDAGAATVIGAKGATIPVQDLLADNGVD 113
            +   + G ++  L+          +P+VMQ                +P+     D   D
Sbjct: 58  NVKAEYTG-WDGHLSRLTTQIAGNTEPDVMQT-----------NWNWLPIFSRTGDGFYD 105

Query: 114 FDINDYIAGVRYFYADS------DGKMIGMPFNSSTPIMYYNIQALEKAGVTAPKTWEEF 167
            +    +  +  F A        DGK+ G+P + +  + YYN +  +K+G+T+PK W+E 
Sbjct: 106 LNKVKDVLDLSQFDAKELQATTVDGKLNGIPISVTARVFYYNTETWKKSGLTSPKNWDEL 165

Query: 168 QT---VTAPALKEAGY-TALSQSHLPWIFTENFHSRHNLPFA-TNNNGYDSVDTQ----I 218
                V    L +  Y   L       +       ++NLP     N  +   D Q     
Sbjct: 166 LNAGKVFKEKLGDQSYPLVLEHQDSLALLNSYMVQKYNLPAVDEKNKKFSYTDAQWVEFF 225

Query: 219 LVNNDAIKAHFTA----VTDWQEKGHFE---WFGTGWGDNQTPFEEGKVAMWLGSSGSFG 271
            +    + AH          + +   +E   W    WG            MW  +   + 
Sbjct: 226 QMYKKLVDAHVMPSAKYYASFGKSNMYEMKPWIAGDWGGTY---------MWNSTITKYS 276

Query: 272 GLSKKNLPFDFSA-TMLPYWEGVTKEPTQTFIGGASLFAMAGHDAEENKATAAFFDFLTS 330
              +     +  A  MLP       +    F   A + ++ G   +  K  A   ++L +
Sbjct: 277 DNLQPPAKLELGAYPMLP-----GAKEAGLFFKPAQMLSI-GKSTKHPKEAAMLINYLLN 330

Query: 331 SEVQYFWHKETGYVPITEAAYEMAKADGHYDRAPAAEVGIQ-QLSLPGGDNTKGYRMGFY 389
           S+           VP+++AA    +ADG    +  +  G+   LSLP    T  Y     
Sbjct: 331 SKEGIQALGLERGVPLSKAAVTQLRADGVIKDSDPSVAGLNLALSLPHETKTSPYFDD-- 388

Query: 390 VQIRDVMNREYGRILTGETSVEDAFNAIEAEANNLLARFAK 430
            QI  +       I   + SVE+     + +A+ +L R  K
Sbjct: 389 PQIVALFGDAIQYIDYDQKSVEETAKYFQRQADRILKRAMK 429