Pairwise Alignments

Query, 433 a.a., sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Phaeobacter inhibens DSM 17395

Subject, 410 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 84/348 (24%), Positives = 153/348 (43%), Gaps = 39/348 (11%)

Query: 10  ATLAFAANAAYAE-TEITWWHAMGGALGDTVNQIASDFNASQDEYKITPVFKGTYEETLT 68
           A+++  A AA+AE   +T W ++   +    N I  +FNA  +  KI    +  +++ ++
Sbjct: 15  ASVSAGAMAAHAEDVTLTLW-SLDRDIQPAPNLI-KEFNALNNGIKIE-YRQLQFDDVVS 71

Query: 69  AGIAAFRAGEQPNVMQVFDAGAATVIGAKGATIPVQDLLADNGVDFDINDYIAGVRYFYA 128
             + A+  G  P+++ + +   A +  ++GA + V D++A + V    N +   ++    
Sbjct: 72  ESMRAYSTGNAPDIIAIDNPNHA-MFASRGAFLDVTDMIAKSDVIKTENYFPGPLKS--V 128

Query: 129 DSDGKMIGMPFNSSTPIMYYNIQALEKAGVTA---PKTWEEF----QTVTAPALKEAGYT 181
             DGK  G+P  ++T  +YYN    + AG+ A   P+TW+E     + +T PA    G +
Sbjct: 129 TWDGKYFGVPKATNTIALYYNKDLFKAAGLDAAKPPQTWDELVDAARKLTNPAKNVYGIS 188

Query: 182 ALSQSHLPWIFTENFHSRHNLPFATNNNG-YDSVDTQILVNNDAIKAHFTAVTDWQEK-G 239
             ++++    F         LP+A      Y +++T     + A+KA  T  T   EK  
Sbjct: 189 FSAKANEEGTF-------QFLPWAQMAGATYKNINT-----DGAVKALETWKTLLDEKLA 236

Query: 240 HFEWFGTGWGDNQTPFEEGKVAMWLGSSGSFGGLSKKNLPFDFSATMLPYWEGVTKEPTQ 299
             +       D+   F  G  AM +        +  K+  FD+  T+LP        P  
Sbjct: 237 SPDTLTRSQWDSTATFNAGNAAMAISGPWEIDRM-LKDAKFDWGVTLLPV--PTPDAPRS 293

Query: 300 TFIG--GASLFAMAGHDAEENKATAAFFDFLTSSEVQYFWHKETGYVP 345
           + +G    ++F+   H AE  KA     +F  S +   F  K  G +P
Sbjct: 294 SAMGDYNWAIFSKTKHPAEAFKA----IEFFASKDKDMF--KNFGQLP 335