Pairwise Alignments

Query, 433 a.a., sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Phaeobacter inhibens DSM 17395

Subject, 439 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  311 bits (797), Expect = 3e-89
 Identities = 170/425 (40%), Positives = 247/425 (58%), Gaps = 13/425 (3%)

Query: 1   MKRIAFTTAATLA---FAANAAYAETEITWWHAMGGALGDTVNQIASDFNASQDEYKITP 57
           +K++++  AA  A   F  + A+A TEI WWHAM GA  + V+ +A +FN SQ +YKITP
Sbjct: 6   LKKLSYRLAAASALSFFVTSNAFAATEIQWWHAMTGANNEVVDTLAKEFNDSQKDYKITP 65

Query: 58  VFKGTYEETLTAGIAAFRAGEQPNVMQVFDAGAATVIGAKGATIPVQDLLADNGVDFDIN 117
           VFKGTY ETL AGIAAFRA + P ++QVFDAG+  ++GA GA  PV D+L + G  F+ +
Sbjct: 66  VFKGTYPETLNAGIAAFRAKQPPAIIQVFDAGSGVMMGAAGAIKPVADVLKEGGYTFNKD 125

Query: 118 DYIAGVRYFYADSDGKMIGMPFNSSTPIMYYNIQALEKAGVTA---PKTWEE-FQTVTAP 173
           +Y+AG+  +Y+  DG M+  P+NSS+PI+YYN    +KAG+ A   PKTW E F+     
Sbjct: 126 EYLAGIVAYYSKPDGTMLSFPYNSSSPILYYNKDIFQKAGLDAANPPKTWPEVFEAAKKI 185

Query: 174 ALKEAGYTALSQSHLPWIFTENFHSRHNLPFATNNNGYDSVDTQILVNNDAIKAHFTAVT 233
               A     + + L WI TENF + +N+ + +N NG    D ++ VN      HF A+ 
Sbjct: 186 KTSGAAQCGFTSTWLTWIQTENFAAWNNVSYGSNENGLGGTDVKLAVNAPLFVEHFQAIA 245

Query: 234 DWQEKGHFEWFGTGWGDNQTPFEEGKVAMWLGSSGSFGGLSKKNLPFDFSATMLPYWEGV 293
           D  + G F  +G    + +  F  G+  +   SSG  G + K  +  ++    LPY+EG 
Sbjct: 246 DLAKDGTFR-YGGRTSEAKQLFMSGECGILTESSGGLGDIVKTGM--NYGIGQLPYYEG- 301

Query: 294 TKEPTQTFIGGASLFAMAGHDAEENKATAAFFDFLTSSEVQYFWHKETGYVPITEAAYEM 353
              P  T  GGASL+   G    E K  A FF FL+ +++Q   H+ +GY+P+T AAYE 
Sbjct: 302 -HGPQNTIPGGASLWVFGGKSDAEYKGVAEFFHFLSQTKIQSRLHQVSGYMPVTIAAYEE 360

Query: 354 AKADGHYDRAPAAEVG-IQQLSLPGGDNTKGYRMGFYVQIRDVMNREYGRILTGETSVED 412
            K  G YD+ PA E   +Q +  P  +N+KG R+    Q+RD+MN E+  +L G+   + 
Sbjct: 361 TKKSGFYDKNPARETPLLQMMGKPPTENSKGVRLVNLPQVRDIMNEEFEAMLAGKQDAKA 420

Query: 413 AFNAI 417
           A + I
Sbjct: 421 ALDKI 425