Pairwise Alignments

Query, 433 a.a., sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Phaeobacter inhibens DSM 17395

Subject, 443 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)

Query: 118 DYIAGVRYFYADSDGKMIGMPFNSSTPIMYYNIQALEKAGVTAPKTWEEFQT----VTAP 173
           D+      F  DSDG +  +PF+    I+Y+N +  E  G+  P+T+EE  T    +T P
Sbjct: 139 DFAEAGMLFAKDSDGVLRSLPFSVDYWIVYWNKELFEAKGLKYPETFEELVTAAEKITDP 198

Query: 174 ALKEAGYTA--LSQSHLPWIFTENFHSRHNLPFATNNNGYDSVDTQILVNNDAIKAHFTA 231
           A    G+ A  L  ++ P ++T         P + +      +DT+     +A K +   
Sbjct: 199 ATNTYGFVARGLKNANTP-VWTSLMLGYGAKPISADG----KIDTESKEAVEAAKLYQRL 253

Query: 232 VTDWQEKGHFEWFGTGWGDNQTPFEEGKVAMWLGSSG 268
           +T     G     G  W + Q+ F +GK+ MW    G
Sbjct: 254 MTKAAPPG---VSGFNWAEAQSAFLQGKIGMWFDGVG 287