Pairwise Alignments

Query, 732 a.a., uvrABC system protein B from Phaeobacter inhibens DSM 17395

Subject, 673 a.a., excinuclease ABC subunit UvrB from Escherichia coli ECOR38

 Score =  776 bits (2003), Expect = 0.0
 Identities = 390/671 (58%), Positives = 500/671 (74%), Gaps = 9/671 (1%)

Query: 28  REFVMHTEFDPAGDQPTAIKELSEGVLEGERNQVLLGATGTGKTFTMAKVIEETQRPAII 87
           + F +++ F P+GDQP AI+ L EG+ +G  +Q LLG TG+GKTFT+A VI + QRP ++
Sbjct: 3   KPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMV 62

Query: 88  LAPNKTLAAQLYGEFKGFFPENSVEYFVSFYDYYQPEAYVARSDTYIEKESQINEQIDRM 147
           LAPNKTLAAQLYGE K FFPEN+VEYFVS+YDYYQPEAYV  SDT+IEK++ +NE I++M
Sbjct: 63  LAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQM 122

Query: 148 RHSATRSLLERDDVIIIASVSCIYGIGSVETYSAMTQDLKVGDEYDQRQVMADLVAQQYK 207
           R SAT+++LER DV+++ASVS IYG+G  + Y  M   L VG   DQR ++  L   QY 
Sbjct: 123 RLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYA 182

Query: 208 RNDQAFQRGSFRVRGDSLEIFPAHLEDRAWRLSFFGEELEGITEFDPLTGEKTGTFDQIR 267
           RNDQAFQRG+FRVRG+ ++IFPA  +D A R+  F EE+E ++ FDPLTG+   T  +  
Sbjct: 183 RNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFT 242

Query: 268 VYANSHYVTPKPTLKQAVISIKEELKMRLDQLVGEGKLLEAQRLEQRTNFDIEMLEATGH 327
           +Y  +HYVTP+  + QA+  IKEEL  R   L+   KLLE QRL QRT FD+EM+   G+
Sbjct: 243 IYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGY 302

Query: 328 CNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQIGGMYKGDHRRKFTLA 387
           C+GIENYSR+L+GR PGEPPPTLF+++P + ++  DESHV++PQIGGMY+GD  RK TL 
Sbjct: 303 CSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLV 362

Query: 388 EHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPSKWELEQSSGVFAEQVIRPTGLLDPQ 447
           E+GFRLPS +DNRPLKFEE++A+ PQ+++VSATP  +ELE+S G   +QV+RPTGLLDP 
Sbjct: 363 EYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPI 422

Query: 448 VEIRPVDMQVDDLLDEVRRVTADGFRTLVTTLTKRMAEDLTEYMHEQGIKVRYMHSDIDT 507
           +E+RPV  QVDDLL E+R+  A   R LVTTLTKRMAEDLTEY+ E G +VRY+HSDIDT
Sbjct: 423 IEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDT 482

Query: 508 LERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRA 567
           +ER+EI+RDLRLG FDVL+GINLLREGLD+PE  LVAILDADKEGFLRSE SLIQTIGRA
Sbjct: 483 VERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA 542

Query: 568 ARNAEGRVIMYADRITGSMERALGETNRRRDKQIAYNEEHGITPATVKKNVEDVLA---G 624
           ARN  G+ I+Y D+IT SM +A+GET RRR+KQ  YNEEHGITP  + K V D+LA    
Sbjct: 543 ARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQN 602

Query: 625 LYAGDVDMNRVTATIDKP------MHGANLEAHLAGLREQMRKAAENLEFEEAARLRDEV 678
           +          +  I +P      M    L+  +  L   M + A+NLEFEEAA++RD++
Sbjct: 603 IAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQL 662

Query: 679 KRLEAVDLAVS 689
            +L  + +A S
Sbjct: 663 HQLRDLFIAAS 673