Pairwise Alignments

Query, 370 a.a., phase integrase-like protein from Phaeobacter inhibens DSM 17395

Subject, 342 a.a., phage-related integrase from Agrobacterium fabrum C58

 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 61/286 (21%), Positives = 108/286 (37%), Gaps = 15/286 (5%)

Query: 40  LPGAYGSVEFRLAYDAAVNPVSDVPKTRGAEGTIDYVVSHYRGNQKFTVLAPSTRYGKGK 99
           L G  G+  F  +Y+ A+       +     G    +++HY+  + F  LA ST+     
Sbjct: 29  LDGHPGTAAFMASYNEAI-----ANRMEPESGRFRSIITHYKATE-FKKLADSTKRVWSP 82

Query: 100 RLDWICQLIGPARLADLE-TRHIENLMDRKGG-----PDAANRLLKELSELFEYARKRLG 153
            +D I +  G   +A    T  I   + +  G     P AA+  ++ LS +  +    +G
Sbjct: 83  WIDRISEHFGNLSIAQFNRTDKIRPRIRQWRGQYSDTPRAADTGMQVLSRILSHGVDPMG 142

Query: 154 MNIRNPTVSVDRRKTRNGGYHTWTIAEVKKFRDHHPSGTMARLALELMLATGAARQDACG 213
               NP   +    + +     WT A++ + +         +  ++L   TG    D   
Sbjct: 143 KLSANPAEGIKHLYSSDRSEIIWTDADIAQVKAE--CSDEVKWVIDLAAHTGLRVSDLLK 200

Query: 214 MGRHNIKGDVIYYRRGKTGQDTELPLAYMPNLVAEIVQLPPDASVFLTHSNGKTYTVESF 273
           +   ++  D I    GK+    E  +     L   + ++P  + V LT S  K +     
Sbjct: 201 LSWSHVGPDAIIISTGKSRHKREAIIPRYDALNEILERIPKRSPVILTSSKKKPWKPSGL 260

Query: 274 GNWF-RDQCVAAGLPDNCRAHGLRKHGATELAEAGANEFQIMAFLA 318
              F R +  A  L  +   H LR   AT+   AG +   I   +A
Sbjct: 261 NTMFWRAKEKAKMLERDLHFHDLRGTAATKFYNAGLSVRVIAEIMA 306