Pairwise Alignments

Query, 350 a.a., putative glycine betaine/L-proline transport system, ATP binding subunit from Phaeobacter inhibens DSM 17395

Subject, 348 a.a., ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) from Agrobacterium fabrum C58

 Score =  210 bits (535), Expect = 4e-59
 Identities = 128/341 (37%), Positives = 196/341 (57%), Gaps = 20/341 (5%)

Query: 10  NLYKIFGANPGTVLPMVRNQGMGKSQLLEEHKHVLGLQDISIDIQAGEISVIMGLSGSGK 69
           N+  +FG  P   L ++ ++G  + ++  +   VLG+ + S+ +  GEI V+MGLSGSGK
Sbjct: 9   NVDIVFGDRPDAALALI-DKGSTRDEINAQTGLVLGVANASLSVSEGEILVLMGLSGSGK 67

Query: 70  STLIRHLNRLIEPTAGEILLDGQDVMDLDPVQ-----LREMRQRSMSMVFQKFALLPHKT 124
           STL+R +N L     G + +  +    +DP +     LR++R  ++SMVFQ+F LLP + 
Sbjct: 68  STLVRAVNGLAPVVRGSVSVKTKSGY-VDPYRCPAKALRDLRMHTVSMVFQQFGLLPWRN 126

Query: 125 VLENAETALRVRGDDRATCEAAARKWLDRVGLSGFENRYPSQLSGGMQQRVGIARALTAD 184
           V +N    L + G   A  +    + L+ V LS + +R   +LSGGMQQRVG+ARA    
Sbjct: 127 VADNVGFGLELSGVPEAERKRMVAEQLELVNLSAWADRKVGELSGGMQQRVGLARAFATG 186

Query: 185 TDIMLLDEAFSALDPLIRTDMQDLLLELQTELHKTIVFITHDLDEALKLADHLVILKDGA 244
             I+L+DE FSALDPLIR+ +QD LLE Q+ L KTI+F++HDLDEA ++ + + +++ G 
Sbjct: 187 APILLMDEPFSALDPLIRSRLQDELLEFQSRLKKTILFVSHDLDEAFRIGNRIAMMEGGH 246

Query: 245 VVQQGPPQGIVMNPADPYIEAFVGDINRARVLRAGTIAVTG--EPEGRLA------GEVD 296
           ++Q G PQ IV  PA PY+  FV ++N   +L A  +   G  E  GRL           
Sbjct: 247 IIQCGTPQQIVRQPATPYVADFVQNMNPISMLTAADVMKRGVDERSGRLTVAATALPSSP 306

Query: 297 WQDTLETVIKKAGGRADVSVSVLRDGQVAGKIEMSELMLAL 337
             D L+ + K AG     ++ V+ +G + G I   E++  L
Sbjct: 307 LIDILDALSKHAG-----AIGVVDNGAIIGTISADEVVAGL 342