Pairwise Alignments

Query, 1119 a.a., carbamoyl-phosphate synthase large chain from Phaeobacter inhibens DSM 17395

Subject, 1073 a.a., carbamoyl phosphate synthase large subunit from Pseudomonas simiae WCS417

 Score = 1254 bits (3246), Expect = 0.0
 Identities = 667/1114 (59%), Positives = 807/1114 (72%), Gaps = 55/1114 (4%)

Query: 1    MPKRTDIQSIMIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGL 60
            MPKRTDI+SI+I+GAGPI+IGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDP +
Sbjct: 1    MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM 60

Query: 61   ADATYIEPITPEVVAKIIEKERPDALLPTMGGQTGLNTALALEEMGVLAKFDVEMIGAKR 120
            ADATYIEPI  + VAKIIEKERPDALLPTMGGQT LN AL LE  GVL KF VEMIGA  
Sbjct: 61   ADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANA 120

Query: 121  EAIEMAEDRKLFREAMDRLGLENPRATIITAPKKDNGNADLDAGVQMALDELEDIGLPAI 180
            + I+ AEDR  F +AM  +GL  PR+ I  + ++ N               LE +G P I
Sbjct: 121  DTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANA-------------VLETLGFPCI 167

Query: 181  IRPAFTLGGTGGGVAYNREDYIHFCRSGMDASPVNQILVDESLLGWKEYEMEVVRDTADN 240
            IRP+FT+GGTGGG+AYNRE++   C  G+D SP  ++L+DESL+GWKEYEMEVVRD  DN
Sbjct: 168  IRPSFTMGGTGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDN 227

Query: 241  AIIVCSIENIDPMGVHTGDSITVAPALTLTDKEYQMMRSASIAVLREIGVETGGSNVQWA 300
             IIVCSIEN DPMGVHTGDSITVAPA TLTDKEYQ++R+AS+AVLREIGVETGGSNVQ+ 
Sbjct: 228  CIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFG 287

Query: 301  VNPADGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELDNDIT-GVTPAS 359
            + P  GRMVVIEMNPRVSRSSALASKATGFPIAK+AAKLAVG+TLDEL NDIT G TPAS
Sbjct: 288  ICPNTGRMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPAS 347

Query: 360  FEPTIDYVVTKIPRFAFEKFAGSEPYLTTAMKSVGETMAIGRTIHESLQKALASMETGLT 419
            FEP+IDYVVTK+PRFAFEKFA ++  LTT MKSVGE MAIGRT  ESLQKAL  +E G+ 
Sbjct: 348  FEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVC 407

Query: 420  GFDEVAIPGAEDETDGKAAVIKAISQQTPDRMRTIAQAMRHGLSDDDIHAVTKFDPWFLA 479
            G DE          +  + + + ++    +R+  +A A R G++ +DI  +   DPWFL 
Sbjct: 408  GLDEKL---DLSNPESMSVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLV 464

Query: 480  RIREIVEAEAKIRAEGLPQ-DEHGLRAIKMLGFTDARLAMLTDQREGDIRAARRALGVNA 538
            +I ++++ E K++  GL   D   +  +K  GF+D RLA L    E ++R  R  L +  
Sbjct: 465  QIEDLIKEEEKVKTLGLASIDRDMMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEIFP 524

Query: 539  VFKRIDTCAAEFEAQTPYMYSTYEAPAFGDVECEARPSDKKKVVILGGGPNRIGQGIEFD 598
            V+KR+DTCAAEF   T Y+YSTYE       ECEA PS + K++ILGGGPNRIGQGIEFD
Sbjct: 525  VYKRVDTCAAEFSTDTAYLYSTYEE------ECEAAPSGRDKIMILGGGPNRIGQGIEFD 578

Query: 599  YCCCHACFALTDAGYETIMINCNPETVSTDYDTSDRLYFEPLTFEHVMEILTKELENGTL 658
            YCC HA  AL + GYETIM+NCNPETVSTDYDTSDRLYFEP+T E V+EI+  E      
Sbjct: 579  YCCVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPK--- 635

Query: 659  HGVIVQFGGQTPLKLANALEEEGIPILGTSPDAIDLAEDRERFQALVNQLGLKQPHNGIA 718
             GVIVQ+GGQTPLKLA ALE  G+PI+GTSPDAID AEDRERFQ +V +L L+QP N   
Sbjct: 636  -GVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATV 694

Query: 719  STDAQALEIAEEIGFPLVIRPSYVLGGRAMEIVRDMDQLKRYIAEAVVVSGDSPVLLDSY 778
             ++ +A+  A +IG+PLV+RPSYVLGGRAMEIV + ++LKRY+ +AV VS DSPVLLD +
Sbjct: 695  RSEDEAIRAASKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHF 754

Query: 779  LSGAVELDVDAICDGTEVHVAGIMQHIEEAGVHSGDSACSLPPYSLSKEVIAEVKTQTNA 838
            L+ A+E+DVDA+CDGT+V +  IMQHIE+AGVHSGDSACSLPPYSL   +  E++ Q   
Sbjct: 755  LNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKK 814

Query: 839  LAKALNVVGLMNIQFAVKPDADGKDVIYLIEVNPRASRTVPFVAKSTDSAIASIAARVMA 898
            +A  L VVGLMN+Q A++    G+D IY+IEVNPRASRTVPFV+K    ++A IAARVMA
Sbjct: 815  MALELGVVGLMNVQLALQ----GED-IYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMA 869

Query: 899  GEPLSNFPKRAPYEPDAGYDVNVPMADPMTLADPDMPWFSVKEAVLPFARFPGVDTLLGP 958
            G+ L          P+                     ++SVKEAV PFA+FPGVD +LGP
Sbjct: 870  GKTLKEIGFTKEIIPN---------------------FYSVKEAVFPFAKFPGVDPILGP 908

Query: 959  EMRSTGEVMGWDRSFARAFLKAQMGAGMVLPSEGRAFISIKDADKGTLMLDAAKILVEQG 1018
            EM+STGEVMG   +F  AF KAQMGA  VLP+ G AFIS++D DK  L+   A+ L+  G
Sbjct: 909  EMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDK-PLVAGVARDLINLG 967

Query: 1019 FTLVATRGTQSWLDGHGVPCELVNKVYEGRPHVVDMLKDGNVQLLMNTTEGAQAVQDSKD 1078
            F +VAT GT   ++  G+    VNKV EGRPHVVDM+K+  V L++NTTEG Q++ DS  
Sbjct: 968  FEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQSIADSYS 1027

Query: 1079 MRSVALYDKIPYFTTAAGANAAARAIKAQAEGDV 1112
            +R  AL  KI   TT A   A   A+K   E  V
Sbjct: 1028 IRRNALQHKIYCTTTIAAGEAICEALKFGPEKTV 1061