Pairwise Alignments

Query, 1119 a.a., carbamoyl-phosphate synthase large chain from Phaeobacter inhibens DSM 17395

Subject, 1162 a.a., carbamoylphosphate synthase large subunit from Agrobacterium fabrum C58

 Score = 1431 bits (3703), Expect = 0.0
 Identities = 754/1180 (63%), Positives = 887/1180 (75%), Gaps = 84/1180 (7%)

Query: 1    MPKRTDIQSIMIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGL 60
            MPKR DI+SI+IIGAGPI+IGQACEFDYSG QACKAL+EEGYRVILVNSNPATIMTDPGL
Sbjct: 1    MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL 60

Query: 61   ADATYIEPITPEVVAKIIEKERPDALLPTMGGQTGLNTALALEEMGVLAKFDVEMIGAKR 120
            ADATY+EPITPEVVAKII KERPDALLPTMGGQT LNTAL+L+ MGVL +++VEMIGAK 
Sbjct: 61   ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP 120

Query: 121  EAIEMAEDRKLFREAMDRLGLENPRATIITAPK-KDNGNADLDAG------------VQM 167
            EAI+MAEDR LFREAM R+GLE P++ +  A + KD      +A             +  
Sbjct: 121  EAIDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKTHEAARTELKAKLSGAELDK 180

Query: 168  ALDELED---------------------------IGLPAIIRPAFTLGGTGGGVAYNRED 200
            ALD LE+                           +GLPAIIRP+FT+GGTGGG+AYNR +
Sbjct: 181  ALDNLENQWNLGETDRKQRYISHAMAIAAQAIDVVGLPAIIRPSFTMGGTGGGIAYNRSE 240

Query: 201  YIHFCRSGMDASPVNQILVDESLLGWKEYEMEVVRDTADNAIIVCSIENIDPMGVHTGDS 260
            +      G+DASP  ++L++ES+LGWKEYEMEVVRD ADN II+CSIENIDPMGVHTGDS
Sbjct: 241  FFEIIGGGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS 300

Query: 261  ITVAPALTLTDKEYQMMRSASIAVLREIGVETGGSNVQWAVNPADGRMVVIEMNPRVSRS 320
            ITVAPALTLTDKEYQMMR+ASIAVLREIGVETGGSNVQ+AVNP DGR+VVIEMNPRVSRS
Sbjct: 301  ITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS 360

Query: 321  SALASKATGFPIAKIAAKLAVGFTLDELDNDITG-VTPASFEPTIDYVVTKIPRFAFEKF 379
            SALASKATGFPIAK+AAKLA+G+TLDEL+NDITG  TPASFEP+IDYVVTKIPRFAFEKF
Sbjct: 361  SALASKATGFPIAKVAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF 420

Query: 380  AGSEPYLTTAMKSVGETMAIGRTIHESLQKALASMETGLTGFDEVAIPGAEDETDGKAAV 439
             G+ P LTTAMKSVGE MAIGRT  ESLQKAL  METGLTG DE+ IPG E+    K A+
Sbjct: 421  PGASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLDEIEIPGYEEGEGSKNAI 480

Query: 440  IKAISQQTPDRMRTIAQAMRHGLSDDDIHAVTKFDPWFLARIREIVEAEAKIRAEGLPQD 499
              AI   TPDR+R +AQAMR G+S++++H  +K DPWF+A+++ IV+ EA+IR  GLPQD
Sbjct: 481  RAAIGTPTPDRLRMVAQAMRMGMSEEEVHENSKIDPWFIAQLKAIVDMEARIREHGLPQD 540

Query: 500  EHGLRAIKMLGFTDARLAMLTDQREGDIRAARRALGVNAVFKRIDTCAAEFEAQTPYMYS 559
               LR +K +GF+DARLA LT +R  ++   R +L V  VFKRIDTCAAEF + T YMYS
Sbjct: 541  AENLRMLKAMGFSDARLASLTSKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTAYMYS 600

Query: 560  TYEAPAFGDVECEARPSDKKKVVILGGGPNRIGQGIEFDYCCCHACFALTDAGYETIMIN 619
            TYE P  G    EA+ SD+KKVVILGGGPNRIGQGIEFDYCCCHA FAL DAG+E IMIN
Sbjct: 601  TYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAIMIN 660

Query: 620  CNPETVSTDYDTSDRLYFEPLTFEHVMEILTKELENGTLHGVIVQFGGQTPLKLANALEE 679
            CNPETVSTDYDTSDRLYFEPLT E V+EI+  E E G L GVIVQFGGQTPLKLA ALE+
Sbjct: 661  CNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAEALEK 720

Query: 680  EGIPILGTSPDAIDLAEDRERFQALVNQLGLKQPHNGIASTDAQALEIAEEIGFPLVIRP 739
             GIPILGT+PD IDLAEDR+RFQ L+ +L L QP+NGIA +  QA  +A EIGFPLV+RP
Sbjct: 721  NGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGFPLVVRP 780

Query: 740  SYVLGGRAMEIVRDMDQLKRYIAEAV---------------------VVSGDSPVLLDSY 778
            SYVLGGRAM+I+    QL+ Y+ + V                      + G +P+L DSY
Sbjct: 781  SYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFDSY 840

Query: 779  LSGAVELDVDAICDGTEVHVAGIMQHIEEAGVHSGDSACSLPPYSLSKEVIAEVKTQTNA 838
            L+ AVE+DVDA+CDG  V V+GIM+HIEEAG+HSGDSACSLP  SLSKE + E++ QT A
Sbjct: 841  LTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDELERQTTA 900

Query: 839  LAKALNVVGLMNIQFAVKPDADGKDVIYLIEVNPRASRTVPFVAKSTDSAIASIAARVMA 898
            LAKAL V GLMN+Q+A+K   DG   IY++EVNPRASRTVPFVAK+  + IA IAARVMA
Sbjct: 901  LAKALKVGGLMNVQYAIK---DG--TIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMA 955

Query: 899  GEPLSNFPKRAPYEPDAGYDVNVPMADPMTLADPDMPWFSVKEAVLPFARFPGVDTLLGP 958
            GE L           DA         DP  L        +VKEAV PFARFPGVD LLGP
Sbjct: 956  GEKL-----------DAAIAAYGEKPDPRNLKH-----IAVKEAVFPFARFPGVDILLGP 999

Query: 959  EMRSTGEVMGWDRSFARAFLKAQMGAGMVLPSEGRAFISIKDADKGTLMLDAAKILVEQG 1018
            EMRSTGEV+G D  FA AF K+Q+GAG+ LP  G  F+S++D DK   +L A +ILVE G
Sbjct: 1000 EMRSTGEVIGLDTDFALAFAKSQLGAGVDLPRSGTVFVSVRDEDKEG-VLSAIRILVESG 1058

Query: 1019 FTLVATRGTQSWLDGHGVPCELVNKVYEGRPHVVDMLKDGNVQLLMNTTEGAQAVQDSKD 1078
            F ++AT GTQ +L   G+  E +NKV EGRPH+ D +++  VQL++NTT+  +A+ DSK 
Sbjct: 1059 FKVLATGGTQRFLAEQGINAEKINKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKS 1118

Query: 1079 MRSVALYDKIPYFTTAAGANAAARAIKAQAEGDVEVKSLQ 1118
            +R   L  K+PY+TT AGA AAA AIKA   G++EVK LQ
Sbjct: 1119 LRRATLMQKVPYYTTMAGAEAAALAIKALKAGNLEVKPLQ 1158