Pairwise Alignments

Query, 521 a.a., exodeoxyribonuclease 7 large subunit from Phaeobacter inhibens DSM 17395

Subject, 532 a.a., exodeoxyribonuclease VII large subunit from Agrobacterium fabrum C58

 Score =  436 bits (1120), Expect = e-126
 Identities = 251/548 (45%), Positives = 329/548 (60%), Gaps = 43/548 (7%)

Query: 1   MSDLFDDPAPSDRPGQNAPEFTVSEISGEVKRTLEGTFGRIRVKGEV-GRVFKARSGHLY 59
           MSD+F   A S     N  EF+VSE+SG +KRT+E  F ++RV+GE+ G      SGH Y
Sbjct: 1   MSDIFSHTALS-----NLAEFSVSELSGSIKRTVETAFEQVRVRGEISGYRGPHSSGHAY 55

Query: 60  YDIKDDRSVLACTTWKGQIASLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQG 119
           + +KDDR+ +    WKG  + L   PEEG+EV+ TG++T F G SKY + ++ +  AG G
Sbjct: 56  FSLKDDRARIDAVIWKGTFSRLKFRPEEGMEVIATGKITTFPGSSKYQIVIESLEPAGAG 115

Query: 120 ALMALLEKRKKQLEAEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKV 179
           ALMALLE R+++L AEGLF   RK+PLP++P++IGVVTSP+GAVIRDILHR+ DRFP  V
Sbjct: 116 ALMALLEDRRRRLAAEGLFDSARKRPLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHV 175

Query: 180 LVWPVAVQGANCAPEVARAIEGFNQLTPGGALPRPDLIIVARGGGSIEDLWGFNEETVAR 239
           +VWPV VQG     EVA AI GFN L PGG + RPD++IVARGGGS+EDLW FN+E V R
Sbjct: 176 VVWPVKVQGEGSGEEVANAIRGFNALKPGGDIARPDVLIVARGGGSLEDLWSFNDEIVVR 235

Query: 240 AVANSQIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELLGWTENQGARLVR 299
           A A S+IPLISAVGHETDTTLID+ +D RAPTPT AAE+AVPVR EL        ARL  
Sbjct: 236 AAAESEIPLISAVGHETDTTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARLSG 295

Query: 300 SAGQAVQQRRQRLNDLARALPKPDTLLETPRQRLDRVSERLPDALIRGVERRRLRLSEAA 359
           S  + +  RRQ +  L RALP  D LL  PR+R D  +  L   L      +R     +A
Sbjct: 296 SVSRQMDNRRQGVRALVRALPSLDQLLALPRRRFDEAASGLGRGLELTTLNKRRAFERSA 355

Query: 360 AALRPSTL-------RQLVGARQDRLRNLSSRLTLR-----------------PIQQDLA 395
           + LRP TL       RQ +  R  R   L  R  L+                  +   L 
Sbjct: 356 SGLRPETLLNGLKHHRQRITERMHRAETLVERRLLQGKGRVDSFDSALRSLPARLLGQLE 415

Query: 396 RQHDRIGQLTQRLEAVQTQRLDRHRQRLEATGRQLEILSYKATLERGYAVVRSDDG-VIT 454
           RQ +R+    +R +     R+ ++R  L A  R L+ LSYK  L RGYAV+R ++   +T
Sbjct: 416 RQKERVVTAARRADTAVLHRMAQNRSGLAAHDRILQSLSYKNVLNRGYAVIRDEENRPLT 475

Query: 455 RATEAATQPRLRIEFADAEID-VTPAEAGGGDGGTPPAKRSSAPKSEASKPGKRPSGKAP 513
           RA   A+   + +EFAD  +  +T  E      GTP  + ++APK + +KP       + 
Sbjct: 476 RAAAIASGAAVSMEFADGRVSAITTGE------GTPAPETAAAPKKKPAKP-----ASSD 524

Query: 514 PDDQGSLF 521
           P +QG+LF
Sbjct: 525 PGNQGNLF 532