Pairwise Alignments

Query, 332 a.a., putative type IV secretion system protein VirB6 from Phaeobacter inhibens DSM 17395

Subject, 311 a.a., type IV secretion protein AvhB6 from Agrobacterium fabrum C58

 Score = 59.7 bits (143), Expect = 9e-14
 Identities = 65/295 (22%), Positives = 123/295 (41%), Gaps = 30/295 (10%)

Query: 25  NVAGQLGGVIAVASTLAVIGIFLNMVFQYKSMDGRTAFWF-ALKLMLISLFAINWVQFNA 83
           N+A  + G + VA TL V+ ++  ++ +    +    F F A+KL +I +   N  ++  
Sbjct: 26  NIAEWVAGPLTVAVTLYVV-LYGYLILRGSVQEPILDFAFRAMKLAIIVMLVKNAGEYQT 84

Query: 84  VASALINGLDQLAGGMVAGLGGGGAGASYFAEAFDDLIEEFGDYLNAAGDNMHWMAGALI 143
             + +    D L   +   L  G A +   A  FD L+++             W    + 
Sbjct: 85  YVTNIF--FDVLPREIAQALNAGTAPS---ASTFDSLLDKGQASATDIWTRASWPIDIVT 139

Query: 144 GAIGAFLLGVIGALCGL---VLIFAKIMLAFMIGIAPIMIALSLFDVSKDYFHRWLSSTV 200
           G  G  ++GV   + G+   V ++A++ LA ++ I PI IAL++F  ++ +   W+    
Sbjct: 140 GVGGIMVIGVSFLVAGIGYVVSLYARLALAIVLAIGPIFIALAMFQSTRRFTESWIGQLA 199

Query: 201 SYALYPLVIAGVFSTVVGMSRSLMTELGDPSG---------ASNIGALVPFFMMMFLA-- 249
           ++ +  +++  V S ++    S  T +   S          A  I AL  F+ +  +A  
Sbjct: 200 NFVILQVLVVAVGSLLISCLDSTFTAIDSYSDVLMRPIAFCAIGIAALYIFYQLPGIASA 259

Query: 250 ---GGMIIATPLIVRSISGNFMMAGPPSMPGPGGFAKGLMGTKGSRARARFGTRS 301
              GG  +         +   M+A   S  G       ++G     AR  FG+R+
Sbjct: 260 LASGGASLVYGYTTARDAHEGMLARAASHTG------RMIGRGARFARRAFGSRN 308