Pairwise Alignments

Query, 237 a.a., putative N-acetylmuramoyl-L-alanine amidase AmiD from Phaeobacter inhibens DSM 17395

Subject, 276 a.a., N-acetylmuramoyl-L-alanine amidase AmiD from Escherichia coli ECOR38

 Score =  110 bits (274), Expect = 4e-29
 Identities = 64/154 (41%), Positives = 86/154 (55%), Gaps = 19/154 (12%)

Query: 30  RPHLIVLHYTAMDSAEAALERLCDPQYEVSAHYLIGA-------DGTLWQMVREADRAWH 82
           R  ++V+HYTA D  +++L  L D Q  VS+HYL+ A          +WQ+V E + AWH
Sbjct: 43  RIKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99

Query: 83  AGAGEWCGQEDINSRSIGIELDNRGDH---------PFSAPQMTRLETLLSAILQRWAIS 133
           AG   W G   +N  SIGIEL+NRG           PF   Q+  L  L   I+ R+ I 
Sbjct: 100 AGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEQAQIQALIPLAKDIIARYHIK 159

Query: 134 PTGVIGHSCMAPGRKSDPGPRFDWARLARQGLAA 167
           P  V+ H+ +AP RK DPGP F W +LA+QG+ A
Sbjct: 160 PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGA 193