Pairwise Alignments

Query, 591 a.a., putative transporter from Phaeobacter inhibens DSM 17395

Subject, 422 a.a., Putative membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  104 bits (260), Expect = 6e-27
 Identities = 60/193 (31%), Positives = 106/193 (54%), Gaps = 3/193 (1%)

Query: 401 LAIGLFAGAVLAASLGIIYLP---IALGLVVVAYVLTKILPLAELYDHIEWPVVVLLGSM 457
           LA+ + + A + A+  I +LP   I      +  V   +L   E ++  E   V +L  M
Sbjct: 228 LAVFILSIAGMVATDYIKFLPPMHIIACCAAIVLVFAGVLTQKETFNSFETLTVFMLAFM 287

Query: 458 IPLGAALDSAGGTALIAESLLTLTAGMPAWAILTVLMVVTMTLSDVLNNTATAIVAAPVG 517
           +PLGAAL+S G   +IA +++++T       I+  L ++T  L+ V++NTA   +  PVG
Sbjct: 288 MPLGAALNSTGAGEMIANAVISVTGDSGVMIIMASLWILTWALTQVMSNTAACTLLCPVG 347

Query: 518 IQMATSLGVSPDPFLMAVAVAASAAFLTPIGHKNNTLVLGPGGYHFGDYWRIGLPLEVLI 577
             +A S+G  P   ++AV +A+S A  TP+    N++++GPG   F D+ + GL + ++ 
Sbjct: 348 WTIAQSIGADPRAVVIAVFIASSVAVCTPMAITANSMIIGPGNVKFKDFLKPGLAISLVC 407

Query: 578 IAVSIPSILLFWP 590
             VS+  + +F+P
Sbjct: 408 FIVSMILLPIFYP 420



 Score = 80.1 bits (196), Expect = 2e-19
 Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 14/219 (6%)

Query: 6   IVLFALFAAVFGLLLWGRYRYDIVAFSALMVAVVLGVVPANDAFAGFGHPATLVVALVLV 65
           I L  L  A+  + +  R    +VAF   M     GV+ A D FA   +   +++  + V
Sbjct: 6   ITLLVLVVAII-IFVSDRLPMGLVAFMVPMALYFTGVIDAKDIFASIVNANVILIVAMCV 64

Query: 66  VSAGLVRSGAVFLITRTLVD---SSRSLGAHITLMGGIGAVLSAFMNNVAALALLMPVDI 122
           + A   ++G  +  ++ L+    + RSL   I L+GG   V+SAF++N   +A+L+P+ +
Sbjct: 65  LGAAFFKTGLAWQSSKILLKYAKTERSLSVLIFLIGG---VMSAFVSNSGTVAVLIPIVL 121

Query: 123 QTARKAGRTPGMSLMPLSFATILGGMATLIGTPPNII----IASIRAETLGEPFGMFDFA 178
             A  +   P   LMPL F   +G   ++IG+P N+I    I +    +L  PF  F++A
Sbjct: 122 GIAASSQIKPIKLLMPLVFGATIGADISIIGSPGNLIAKNTIETFSKGSLSVPF--FEYA 179

Query: 179 PVGGIAALAGLLFVALIGWRLIPLRQ-NAAGASEAQLSQ 216
            +G    +A  +F+   G +LI  R  N    S+   SQ
Sbjct: 180 KIGIPLLIACSIFLYFFGSKLIADRDGNTQSDSQMDYSQ 218



 Score = 41.6 bits (96), Expect = 7e-08
 Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 14/166 (8%)

Query: 426 LVVVAYVLTKILPLAELYDHIEWPVVVLLGSMIPLGAALDSAGGTALIAESLLTLTAGMP 485
           +V +A   T ++   +++  I    V+L+ +M  LGAA    G     ++ LL       
Sbjct: 31  MVPMALYFTGVIDAKDIFASIVNANVILIVAMCVLGAAFFKTGLAWQSSKILLKYAKTER 90

Query: 486 AWAILTVLMVVTMTLSDVLNNTATAIVAAPVGIQMATSLGVSPDPFLMAVAVAAS-AAFL 544
           + ++L  + ++   +S  ++N+ T  V  P+ + +A S  + P   LM +   A+  A +
Sbjct: 91  SLSVL--IFLIGGVMSAFVSNSGTVAVLIPIVLGIAASSQIKPIKLLMPLVFGATIGADI 148

Query: 545 TPIGHKNN--------TLVLGPGGYHFGDYWRIGLPLEVLIIAVSI 582
           + IG   N        T   G     F +Y +IG+P   L+IA SI
Sbjct: 149 SIIGSPGNLIAKNTIETFSKGSLSVPFFEYAKIGIP---LLIACSI 191



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 28  IVAFSALMVAVVLGVVPANDAFAGFGHPATLVVALVLVVSAGLVRSGAVFLITRTLVDSS 87
           I+A  A +V V  GV+   + F  F      ++A ++ + A L  +GA  +I   ++  +
Sbjct: 252 IIACCAAIVLVFAGVLTQKETFNSFETLTVFMLAFMMPLGAALNSTGAGEMIANAVISVT 311

Query: 88  RSLGAHITL--MGGIGAVLSAFMNNVAALALLMPVDIQTARKAGRTPGMSLMPLSFATIL 145
              G  I +  +  +   L+  M+N AA  LL PV    A+  G  P   ++ +  A+ +
Sbjct: 312 GDSGVMIIMASLWILTWALTQVMSNTAACTLLCPVGWTIAQSIGADPRAVVIAVFIASSV 371

Query: 146 GGMATLIGTPPNIII 160
                +  T  ++II
Sbjct: 372 AVCTPMAITANSMII 386