Pairwise Alignments

Query, 186 a.a., PHA synthesis repressor protein PhaR from Phaeobacter inhibens DSM 17395

Subject, 191 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  107 bits (267), Expect = 1e-28
 Identities = 69/197 (35%), Positives = 102/197 (51%), Gaps = 18/197 (9%)

Query: 1   MSDQDKPLLIKRYASRRLYNTETSDYVTLEDIAGFIREGREVQIVDLKTGDDLTRQYLLQ 60
           M+  D   +IK+YA+RRLYNT TS YVTL+D+A  ++ G + ++ D K+ +D+T   L Q
Sbjct: 1   MAKHDGETIIKKYANRRLYNTGTSTYVTLDDLAQMVKRGEDFKVQDAKSSEDITHAVLTQ 60

Query: 61  IIAEHESR-GENILPVNVLNDLVRSYMVPGGGVMPQFLQSSFEMLRENQSKMVENM---- 115
           II E E++ G  +LP   L  L+  Y      V+P FL+ S +   + QS+M E+M    
Sbjct: 61  IIVEQEAKTGNTLLPTAFLRQLISYYGDQMQMVVPTFLEHSMKTFSDQQSQMQEHMAKAF 120

Query: 116 -------NAMNPMAQMPGFEAIKAQQEAFLKAMAGGFSGGWPAGGKSSGDAETAEDGDGL 168
                  N   P+  M   E I+   E F +AM G      P   K +     +E    +
Sbjct: 121 GDGSLARNFQAPLQMME--EQIRRNTELFRQAMQGFTPFAMPQAPKETRKPNASE----I 174

Query: 169 DDIKRQLAELQDKLSKL 185
           D++K QL  LQ KL +L
Sbjct: 175 DELKAQLRALQQKLDQL 191