Pairwise Alignments

Query, 411 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Phaeobacter inhibens DSM 17395

Subject, 454 a.a., two component response regulator for C4-dicarboxylate transport from Agrobacterium fabrum C58

 Score =  273 bits (698), Expect = 8e-78
 Identities = 171/446 (38%), Positives = 240/446 (53%), Gaps = 45/446 (10%)

Query: 5   VLVVDDDAAVRAALGQTLELAECDAITVGSFVAAKDLITP---DFDGVILSDMRMPGRDG 61
           + +VDDD+ +R A+ QTLEL   D + V SF  A+  +     DFDG+I++D+RMPG  G
Sbjct: 7   IFLVDDDSQLRKAMVQTLEL---DGLPVTSFSRAEQALAALNEDFDGIIITDVRMPGMTG 63

Query: 62  FHLLRYVREVDGDLPVILLTGEGDIPMAVQAMGEGAFDFLEKPCASVDLMAVVRRALKTR 121
                +VR++D DLPVIL+TG GD+PMAV A+  GA+DF+ KP  +  ++   RRAL+ R
Sbjct: 64  LEFFDHVRKIDADLPVILITGHGDVPMAVDALHNGAYDFIAKPFPAERMVESARRALEKR 123

Query: 122 ALVRENRALKSRLESGDPAARMIFGTSPQMEELRARARGVAATGAEVLVTGAPGGGISKV 181
            LV ENRAL+      +    +I G +P ME LR   R +A T  +VLV G  G G   V
Sbjct: 124 RLVLENRALRRAAGQAEDDLPLI-GQTPAMERLRTTLRHIADTDVDVLVAGETGSGKEVV 182

Query: 182 AEVIHLMS-PRGQGAFV------------KRPAAGLTPDGFADLCRE-------AAGGSL 221
           A  +H  S  R +G FV            +    G  P  F    ++       ++GG+L
Sbjct: 183 ATALHRWSKKRSKGNFVALNCGALPETVIESELFGHEPGAFTGAQKKRVGRIEHSSGGTL 242

Query: 222 YLDEIAALPSETQYAMLEALE----------QEQGLEARVLVGSVADLAEEAAQGRFLPD 271
           +LDEI ++P   Q  ML  LE          +E+ ++ RV+  +  DL + A +G F  D
Sbjct: 243 FLDEIESMPLAVQVKMLRVLEMREVSPLGSNEERPVDIRVVAAAKVDLGDPAERGTFRED 302

Query: 272 LFYRLDVMRVRIPALSERPEDIPVLFSHYVAQAAEQAGIAAPDIPQEHLAALMAQDWPGN 331
           L+YRL+V+ + IP L ER  DIP+LFSH+V +AA +  +  P I       L   DWPGN
Sbjct: 303 LYYRLNVVTLSIPPLRERKADIPLLFSHFVTKAANRFNMPVPQISAGTSRRLQDHDWPGN 362

Query: 332 ARSLMSAAMRFVLGMPEEAAQS--------AELGLAEQLAQVERSLLIAALGRQNGHASA 383
            R L   A R VLG+  E A +        A   L E++ ++E  ++   L R NG  + 
Sbjct: 363 VRELGHFAERVVLGLEAEPAAAPTSQSAIPASGTLPERMDEIEAHIIRETLERSNGDVAE 422

Query: 384 AAKALKLPRKTFYDKLARYGIRPEDY 409
               L + RKTFYDKL R+GI   DY
Sbjct: 423 TIATLGIARKTFYDKLQRHGINRADY 448