Pairwise Alignments

Query, 225 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, small permease component (from data) from Phaeobacter inhibens DSM 17395

Subject, 186 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 10/127 (7%)

Query: 10  GLINTLEETLIAL---LLGLMTLITFANVVARFVFNSNILWALELTVFLFAWLVLLGASY 66
           GL+      ++AL    L   +LI   +VV+RF F++   W  E +VFL   +  + A++
Sbjct: 29  GLLRRANRLILALGSIALVAASLILSYSVVSRFFFHAPTYWQDEASVFLLVGVTFMTAAF 88

Query: 67  AVKVHAHLGVDAILNMVSPGARR----VIGLISVGCCLVFSLLLLKGAYDYWAVFADLPP 122
                 H+ +DA+ +M+ PG  R    V+ + S   C  F+       ++ W    D   
Sbjct: 89  VQSQRGHVAIDALAHMLPPGLNRVRQFVVDVFSFAFCAFFTWKSFTLWHEAW---VDGQV 145

Query: 123 TSGRWFP 129
           TS  W P
Sbjct: 146 TSSTWAP 152