Pairwise Alignments

Query, 225 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, small permease component (from data) from Phaeobacter inhibens DSM 17395

Subject, 210 a.a., C4-dicarboxylate TRAP transporter small permease protein DctQ from Pseudomonas sp. DMC3

 Score = 65.1 bits (157), Expect = 1e-15
 Identities = 57/231 (24%), Positives = 89/231 (38%), Gaps = 74/231 (32%)

Query: 16  EETLIALLLGLMTLITFANVVAR--------------------FVFNSNIL-------WA 48
           EE  I  LL  MTL+TF  V+                      F     I+       W+
Sbjct: 12  EEGFIVFLLAAMTLVTFVYVILNNFYSLFYWLADHWPAASVPLFAVGDQIMGMAQAMTWS 71

Query: 49  LELTVFLFAWLVLLGASYAVKVHAHLGVDAILNMVSPGARRVIGLISVGCCLVFSLLLLK 108
             LT  LF WL+  G +Y V+   H+GVDA++ +     +R IG+++  CCL ++ LL  
Sbjct: 72  TALTKALFGWLIFFGLAYGVRTAGHIGVDALVKLARRSVQRYIGILACLCCLAYAGLL-- 129

Query: 109 GAYDYWAVFADLPPTSGRWFPTGFDMKARSQSFYEVQDVPMVAIFGFLEDLINYGDSYEK 168
                                                    VA F ++E L+N G   E 
Sbjct: 130 ----------------------------------------AVASFEWIETLMNAGIGAED 149

Query: 169 LPK--VVPY---VVLPLSMLLMLLRFAQAAMQILRGDVDRLVASHEVEDEI 214
           L    V+ +   +++PL   L+ +RFA+  ++IL      L  + E  D +
Sbjct: 150 LGHFGVMQWHIGLIVPLGFALVFIRFAEILLRILLNRQTGLGLADEAADAL 200