Pairwise Alignments

Query, 344 a.a., transposase from Phaeobacter inhibens DSM 17395

Subject, 326 a.a., IS110-like element IS621 family transposase from Escherichia coli ECRC62

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 87/356 (24%), Positives = 146/356 (41%), Gaps = 55/356 (15%)

Query: 3   YYVGLDVSLRSVAVCVIDVDGKHIFER--SVACEIEDILACLRDVPDGQYRVGFES-GAM 59
           +Y+G+D +   + V V+  DG+H  ++  +     +++++ L+        +  E+ G  
Sbjct: 6   HYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELVSWLKGHKIDHAHICIEATGTY 65

Query: 60  SQHLYYGLRNAG--LNVVCMEARQVNAALSAMRNKTDKTDARGIAQVLRSGWYGKVFIKS 117
            + +   L +AG  ++V+     +  A    +RNKTD  DAR +A+  R           
Sbjct: 66  MEPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTDTVDARMLAEFCRQKRPAAWEAPH 125

Query: 118 REAHALRALLSSRKAVQKKCIDLANEVRGLFRVFGLRLPSRVDQGSFDERVRPLIEADPD 177
               ALRAL+   +A+        N                    +  E  RP I+A   
Sbjct: 126 PLERALRALVVRHQALTDMHTQELNRTE-----------------TAREVQRPSIDAH-- 166

Query: 178 LSRALLPLLDARVMLYKTYRELDRRVKQAASHDEICLR----FMAIPGVGPIAALTFRAA 233
                L  L+A +      + L++++K     D           +IPG+G   +    A 
Sbjct: 167 -----LLWLEAEL------KRLEKQIKDLTDDDPDMKHRRKLLESIPGIGEKTSAVLLAY 215

Query: 234 VDNPARFTSSRTVAAHFGLTPRRYQSG-EMDNPGRISKAGDSDVRATLYAAANAMMMRAV 292
           +    RF  +R  AA  GLTPRRY+SG  +    R+SKAG   +R  LY       M A+
Sbjct: 216 IGLKDRFAHARQFAAFAGLTPRRYESGSSVRGASRMSKAGHVSLRRALY-------MPAM 268

Query: 293 ASSEIKSWGLRLMRR---KGRRRAVV--AVARKLAVIMHRMWADNTEF---RHGKV 340
            ++    WG     R    G++  V+  A+ RKLA + + +      F   RH  V
Sbjct: 269 VATSKTEWGRAFRDRLAANGKKGKVILGAMMRKLAQVAYGVLKSGVPFDASRHNPV 324