Pairwise Alignments

Query, 360 a.a., TRAP transporter, subunit DctP from Phaeobacter inhibens DSM 17395

Subject, 365 a.a., periplasmic mannitol-binding protein from Agrobacterium fabrum C58

 Score =  224 bits (572), Expect = 2e-63
 Identities = 120/317 (37%), Positives = 176/317 (55%), Gaps = 4/317 (1%)

Query: 1   MDRRSFLKTSALGGSAAAATTLAAPAYAQGKRTLT--MVTTWGRGLAGVHDSAQYVADAI 58
           MDRRSF+K  AL G  AAAT LAAPA AQ    +   + +++ + L  ++  A+ +A  +
Sbjct: 1   MDRRSFMKKGALAG--AAATALAAPAIAQQNTKINWRLTSSFPKSLDTIYGGAEDIAKHV 58

Query: 59  TAMSGGDLTVDVKAAGELVGAFEVFDAVTAGQADMYHGADYYFTGQHPGYAYFTAVPFGM 118
            A + G+ T+   AAGE+V   +  DAV++G  +M H   YY+ G+ P +A  TA+PFG+
Sbjct: 59  AAATDGNFTIQPFAAGEIVPGLQAADAVSSGTVEMCHTCSYYYVGKDPTFAIGTAIPFGL 118

Query: 119 TPQELTNWYYHGDGHALHDELGQIFGLKSFIGGNTGPQAGGWYNKEIKGPEDFNGLKFRM 178
             +   +W+Y G+G+ L +E      L   I GNTG Q GGW+ KEI   +DF G+K R+
Sbjct: 119 NARLTNSWFYEGNGNKLLNEFYAKHNLYGMISGNTGAQMGGWFRKEINTVDDFKGVKMRI 178

Query: 179 PGLGGKALGKLGASVQNIPGSEVYQALSSGAIDGTEWIGPWADEKAGFQEITKTYYTAGF 238
            GL GK + KLG   Q I G ++Y AL  G ID  EW+GP+ D K GFQ++ K YY   F
Sbjct: 179 AGLAGKVVEKLGVVPQQIAGGDIYPALEKGTIDAAEWVGPYDDHKLGFQKVAKYYYYPAF 238

Query: 239 HEPGAALSVATNRDVFEGLSPAHQKVIEMASAAGHQWSLAQFMNNNGAALQRLQSGGVKT 298
            E G  +    N D +  L   +Q V++ A A  +   +A++   N  A+++L S G   
Sbjct: 239 WEGGPVIHSFVNLDKWNSLPKNYQMVLQDACAFANTSMMAKYDAKNPIAIKQLVSEGAVL 298

Query: 299 LEFPDSVWDAFGSATKE 315
             F   + +A   A  E
Sbjct: 299 RPFSQEILEACYKAALE 315