Pairwise Alignments

Query, 785 a.a., TRAP transporter, subunit DctM from Phaeobacter inhibens DSM 17395

Subject, 490 a.a., permease component of C4 dicarboxylate transporter from Agrobacterium fabrum C58

 Score =  149 bits (375), Expect = 5e-40
 Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 28/193 (14%)

Query: 115 ERVLAGASIETLLAVLMFVLMGITLERSKIANDLLTTMARVFGPLPGGLAVSIVVVGAFL 174
           +R+    S ETLLA+  F  MG+ LE+S +A DLL T+ ++FGP+ GG+A +++ VGA L
Sbjct: 46  DRIFGQMSNETLLAIPFFTFMGLILEKSGMAEDLLDTIGQLFGPVRGGIAFAVIFVGAIL 105

Query: 175 AASTGIVGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAG 234
           AA+TG+V A+V++MGL++LP MLR  Y  ++A G IAASGTL QIIPPS+V+++L    G
Sbjct: 106 AATTGVVAASVISMGLISLPIMLRYGYDRKIAAGTIAASGTLAQIIPPSLVLIVLADQLG 165

Query: 235 DLYSTAQEARAQEFGCSDALTYLGEPAVVSVGTLFQAALLPGIMLALLYALYAFGYALLN 294
                                        SVG +++ AL+PG+ML   Y LY    ++++
Sbjct: 166 R----------------------------SVGDMYKGALIPGLMLVGAYTLYIVVTSIIS 197

Query: 295 PEKAPAVVLEGGT 307
           P K PA+  E  T
Sbjct: 198 PAKVPALPSEART 210



 Score =  122 bits (305), Expect = 6e-32
 Identities = 99/357 (27%), Positives = 171/357 (47%), Gaps = 54/357 (15%)

Query: 456 IGVLLIALVDVVAIAPTTSPGITVLLIALPTLLAL-YGCRIAAGRSARNDLIRVVFPPLI 514
           +G +L A   VVA +      I++ LI+LP +L   Y  +IAAG  A +  +  + PP +
Sbjct: 101 VGAILAATTGVVAASV-----ISMGLISLPIMLRYGYDRKIAAGTIAASGTLAQIIPPSL 155

Query: 515 LIVAV---LGSILGGITNPTPAAALGAGGAIML----------AAYRKLQDQGKS---GK 558
           +++ +   LG  +G +        L   GA  L          A    L  + ++    K
Sbjct: 156 VLIVLADQLGRSVGDMYKGALIPGLMLVGAYTLYIVVTSIISPAKVPALPSEARTLRGSK 215

Query: 559 IIIWATFA-----VAICILVGVNFDLRINGRSGVSAETVIAFGVAYGAYLFALFGLLYGC 613
           +++    +     V I +++G  F        G++  T      A GA   AL       
Sbjct: 216 LLLKVITSLVPPLVLIFLVLGTIF-------LGIATPTEGGAMGAVGALALALANRKLNL 268

Query: 614 WVLFKGGVLTPVVRETAKVTSMVFTILIGSQLLNLVVISFGGEHYIQQFLKSFDS-ELKV 672
                 G++   +  TAK++S V  IL+G+++ +L      G  +++  + S    E+  
Sbjct: 269 ------GLIQQSLYATAKLSSFVLLILLGARVFSLTFYGVNGHVWVEHLMTSVPGGEIGF 322

Query: 673 FLIVMVVLFILGFVLDFLEIIYIVIPIVGPVIYGGSFDPKWVTIMVAVNLQTSFLTPPFG 732
            ++  +++F L F LD+ E+ +I+IP++ PV      D  W  +M+AVN+QTSF+ PPFG
Sbjct: 323 LIVANLLVFFLAFFLDYFELAFIIIPLLAPVADALGIDLIWFGVMLAVNMQTSFMHPPFG 382

Query: 733 FALFYLRGVAP-------------KEVTTAHIYRGVLPFVLIQVVGLGILWMFPSIV 776
           F+LF+LR VAP             + +T++ IY G +P++ IQ+  + I+  FP IV
Sbjct: 383 FSLFFLRSVAPTRAYRDRITGQTIQPITSSQIYLGAIPYLFIQLAMVIIIIAFPGIV 439