Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 329 a.a., Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  164 bits (415), Expect = 3e-45
 Identities = 117/334 (35%), Positives = 171/334 (51%), Gaps = 41/334 (12%)

Query: 2   ITVSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVPP 61
           ITV E+ A QR+D +L R+   V +  I ++ R GE+R + GRV A+ RVA G V+R+PP
Sbjct: 13  ITVDEESAGQRLDNFLIRILKGVPKSHIYRIIRSGEVRRNKGRVSADDRVAVGDVLRIPP 72

Query: 62  LGASDLKPAEAPSYRISEADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGLS 121
           +  S+     A       A A+     V+++D+A + ++KPAG+AV GGSG +  V    
Sbjct: 73  IRLSE----RAEEKAAHPAPAREFP--VVFEDEAFLAIDKPAGVAVHGGSGVSFGV---- 122

Query: 122 AALQFDAEEKPR-----LVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVA 176
             ++   + +P+     LVHRLD++TSG+L++A+ + A ++L   FR R T K Y ALV 
Sbjct: 123 --IEQMRQARPQARLLELVHRLDRETSGLLLIAKKKSALKALQDQFRERETGKTYLALVK 180

Query: 177 GVPTPYLGEIKCGLVKAPGHGKSGEGEKMIAIHSNEVDSTPGAKRSHTHYATLYRVASRA 236
           GV    L  +   L K        +GE+ + + + +    P    S T      RV +  
Sbjct: 181 GVWPARLKVLDQPLHKY----LLPDGERRVRVTTPD---DPDGMCSVTLVKVAQRVPAPP 233

Query: 237 AWVAMEP----------ITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGG 286
              A  P           TGRTHQ+R H++  GHPIAGD KYG             QL  
Sbjct: 234 GLEAGAPEGFSLLEVTIKTGRTHQIRVHLSSAGHPIAGDDKYGDFELNR-------QLAR 286

Query: 287 IISKKLHLHCRRMAFEHPTTKKPLSITAPLPDHM 320
           I  K++ LH  R+   HP TK PL + A LP  +
Sbjct: 287 IGLKRMFLHAWRLRLTHPVTKSPLELQAELPPEL 320