Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 229 a.a., RNA pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  144 bits (363), Expect = 2e-39
 Identities = 86/243 (35%), Positives = 121/243 (49%), Gaps = 27/243 (11%)

Query: 89  VIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGLSAALQFDAEEKPRLVHRLDKDTSGVLVL 148
           V+YKD  VIVL+KPAGLAV  G  +  H++    AL F   E P+L HRLD+DTSG L+L
Sbjct: 10  VLYKDQDVIVLDKPAGLAVHAGPNSPDHLELYLGALAFGWAEMPKLAHRLDRDTSGCLIL 69

Query: 149 ARTRLAAQSLTAAFRHRATRKIYWALVAGVPTPYLGEIKCGLVKAPGHGKSGEGEKMIAI 208
            R   A + L   F HR   K+YW++  G P    G +   L+K    G+          
Sbjct: 70  GRHAKAIKRLGKMFEHRRVEKVYWSVSHGSPAADSGTVDAPLLKVSARGQGW-------- 121

Query: 209 HSNEVDSTPGAKRSHTHYATLYRVASRAAWVAMEPITGRTHQLRAHMAEIGHPIAGDGKY 268
               +   P  + S T ++ L R +   +W+   P TGRTHQ+R H   +G P+ GD  Y
Sbjct: 122 ---RIKVDPAGQPSITDWSVLGR-SDGLSWIEWRPRTGRTHQIRIHAQYLGCPLLGDAYY 177

Query: 269 GGSSQENLGDGWGAQLGGIISKKLHLHCRRMAFEH-PTTKKPLSITAPLPDHMKDSWDTF 327
           G   +  +              +LHL  R +AF     +K P+ +TAP P+HM ++    
Sbjct: 178 GPDPEPKV--------------RLHLLARAVAFPALAPSKDPVRVTAPPPEHMVEALRRC 223

Query: 328 GWS 330
           GWS
Sbjct: 224 GWS 226