Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 225 a.a., RNA pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  142 bits (357), Expect = 1e-38
 Identities = 93/243 (38%), Positives = 122/243 (50%), Gaps = 25/243 (10%)

Query: 89  VIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGLSAALQFDAEEKPRLVHRLDKDTSGVLVL 148
           ++Y+D AV++++KPAGLAV  G    +H+     AL F  + +P L HRLD++TSG LVL
Sbjct: 7   LLYRDPAVLIIDKPAGLAVHAGPKGGEHLMLYLDALSFGLKRRPELAHRLDRETSGCLVL 66

Query: 149 ARTRLAAQSLTAAFRHRATRKIYWALVAGVPTPYLGEIKCGLVKAPGHGKSGEGEKMIAI 208
            RT  A   L   F      K YWA+V G P    G I   L K     +   G +M   
Sbjct: 67  GRTSKALAGLGELFAKGLADKTYWAVVVGKPREDQGVIDYALKKR----EKKFGWRM--- 119

Query: 209 HSNEVDSTPGAKRSHTHYATLYRVASRAAWVAMEPITGRTHQLRAHMAEIGHPIAGDGKY 268
              EVD T  A  S T +  L     R +W+   P+TGRTHQ+RAH A IGHP+ GD  Y
Sbjct: 120 ---EVDRTGLA--SVTQW-RLLGSDGRLSWLECRPLTGRTHQIRAHCAAIGHPLVGDSIY 173

Query: 269 GGSSQENLGDGWGAQLGGIISKKLHLHCRRMAFEHPTTKKPLSITAPLPDHMKDSWDTFG 328
           G  +    GD            +L LH RR+       K P++  AP+P+HM       G
Sbjct: 174 GRGTGTLAGD------------RLMLHSRRIVLPFHAGKPPIAAEAPVPEHMLSVLKGCG 221

Query: 329 WSE 331
           WSE
Sbjct: 222 WSE 224