Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 316 a.a., ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) from Kangiella aquimarina DSM 16071

 Score =  168 bits (425), Expect = 2e-46
 Identities = 115/322 (35%), Positives = 167/322 (51%), Gaps = 27/322 (8%)

Query: 2   ITVSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVPP 61
           + V  ++A QRID +L +    V + RI KM RKGE+R++ GRVKA  ++  G  VR+PP
Sbjct: 12  VEVQTEEAGQRIDNFLLKKLKGVPKSRIYKMLRKGEVRVNKGRVKAEYKIEEGDSVRIPP 71

Query: 62  LGASDLKPAEAPSYRISEADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGLS 121
           +  ++ +  E P   ++    + +   ++Y+D  +IVLNKP G+AV GGSG +    G+ 
Sbjct: 72  VKTTNTE-TEVP---VNLNIVQDLENAILYEDKRLIVLNKPHGMAVHGGSGMS---FGVI 124

Query: 122 AALQFDAEEKP--RLVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAGVP 179
            AL+    E P   LVHRLD+DTSG L++A+ R   + L    + +   K YWALV G  
Sbjct: 125 EALRALRPEAPFLELVHRLDRDTSGCLLIAKKRSTLRFLHEQLQKKLMSKQYWALVEGKW 184

Query: 180 TPYLGEIKCGLVKAPGHGKSGEGEKMIAIHSNEVDSTPGAKRSHTHYATLYRVASRAAWV 239
              L  I   L K   H KSGE           V  T G K S T ++ +         V
Sbjct: 185 PAKLKHIDYPLAK--HHLKSGE---------RIVRVTEGGKPSLTSFSVVENFKD-FTLV 232

Query: 240 AMEPITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLHLHCRRM 299
           + EP+TGRTHQ+R H  + GHP+ GD KYG           G      +S +L LH   +
Sbjct: 233 SAEPVTGRTHQIRVHAQQAGHPLVGDPKYGNDEITERFKQQG------LSGRLFLHAYSL 286

Query: 300 AFEHPTTKKPLSITAPLPDHMK 321
            F+     K + + APLP+ ++
Sbjct: 287 TFKVTPEDKAIKVEAPLPEDLQ 308