Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 329 a.a., ribosomal large subunit pseudouridine synthase C from Agrobacterium fabrum C58

 Score =  273 bits (697), Expect = 6e-78
 Identities = 152/331 (45%), Positives = 204/331 (61%), Gaps = 22/331 (6%)

Query: 2   ITVSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVPP 61
           I V  D+A  R+DRW +  +P +  G+++K+ R G++R+DGGRVK ++RV  GQ+VRVPP
Sbjct: 7   IKVEADEAGMRLDRWFKIHYPGLGFGQLQKLLRSGQVRVDGGRVKTDARVQPGQMVRVPP 66

Query: 62  LGASDLKPAEAPSYRIS---EADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVD 118
           +  SD+K    P         AD +++   ++++DD V+V NKPAG+AVQGGSG  +H+D
Sbjct: 67  VD-SDMKTKTGPIGSKDLKHSADGELLARMLLHEDDKVLVFNKPAGIAVQGGSGVNRHID 125

Query: 119 GLSAALQFDAEEKPRLVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAGV 178
           GL  A      EKPRLVHRLD+DTSGVLV+ARTR AAQ LTAAFR R T+K YWALV GV
Sbjct: 126 GLLEAWTSPKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTYWALVRGV 185

Query: 179 PTPYLGEIKCGLVKAPGHGKSGEGEKM-IAIHSNEVDSTPGAKRSHTHYATLYRVASRAA 237
           P  +  +I   LVK     ++ +G++M IA H  E     GA  + ++Y  +   A   A
Sbjct: 186 PRKHQDKISTWLVKE----QTPDGDRMRIAKHGEE-----GADHAISYYRVIDTAAQNLA 236

Query: 238 WVAMEPITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLHLHCR 297
           W+ MEP TGRTHQLR H   +GHPI GD KY         D       G + K+LHLH R
Sbjct: 237 WLEMEPYTGRTHQLRVHALHMGHPIIGDPKY-------YIDDPNWDFPGGVQKRLHLHAR 289

Query: 298 RMAFEHPTTKKPLSITAPLPDHMKDSWDTFG 328
            +   HP   + L ++APLP HM  +W+  G
Sbjct: 290 HIDIPHPNGGR-LRVSAPLPPHMVQTWNLLG 319