Pairwise Alignments

Query, 430 a.a., putative efflux transporter, RND family, MFP subunit from Phaeobacter inhibens DSM 17395

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score = 80.1 bits (196), Expect = 1e-19
 Identities = 89/338 (26%), Positives = 142/338 (42%), Gaps = 41/338 (12%)

Query: 96  GQTQAIRQVEVRSETTSTVLSEPLRKGAQVKAGDLLCKLDPGTRPSTLLEAKARLSEAKI 155
           G   A   V VRS     ++    ++G +VKAGDLL ++DP  RP             +I
Sbjct: 85  GTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDP--RP------------YRI 130

Query: 156 RVPEARARLDESRARLKEAQINLTAAAKLSEGGFASETRLASSQAAERSAVAGVATAETG 215
            + +A   L +++A+LK AQ++L               R     A +  A   + TAE  
Sbjct: 131 ALQQAEGTLAQNQAQLKNAQVDL--------------ARYKGLYAEDSIAKQTLDTAEAQ 176

Query: 216 LETTSAGIEAASAQVAAAEKELARLDILAPFDGLLESDTAELGSLMQPGSLCATVI--QL 273
           +      ++   AQV  A   L    I AP  G +     +LG+L+      A V+  Q 
Sbjct: 177 VAQFQGLVKTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQT 236

Query: 274 ETIKLVGYVPETEVN----RVTIGAGARAELANGRNVE----GKVTFISRSADPTTRTFE 325
           E I +   +PETE++    R   GA    E  +  + +    G +  I    D TT T +
Sbjct: 237 EPINVAFTLPETELSTVLERYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLK 296

Query: 326 VEITVPNPDLAIRDGQTADIVISAEGSKAHYL-PQSALTLNNDGQLGVRVVEDDMTVGFY 384
            +    N DLA+   Q  ++ + A+  K   + P +A+   NDG     VV +  TV   
Sbjct: 297 FKGRFENKDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAY-VVNEQSTVNVR 355

Query: 385 PIQL-LRDEASGVWLGGLPEQADVIVVGQDFVVAGVSV 421
            +++   D  + V L GL     +++ G D +  G  V
Sbjct: 356 KLKVGASDGENSVILDGLKAGDRLVLEGTDRLREGTKV 393