Pairwise Alignments

Query, 335 a.a., phage late control gene D protein (GPD) from Phaeobacter inhibens DSM 17395

Subject, 366 a.a., late control protein D from Escherichia coli ECOR38

 Score =  154 bits (388), Expect = 4e-42
 Identities = 105/352 (29%), Positives = 179/352 (50%), Gaps = 36/352 (10%)

Query: 8   PFFRVEVDGKDISSTLAPRLISLSLTDAAGVQSDNVQITLSDTTLFGRLAEPKAGAEIRV 67
           P F + ++G+DI++ L  RL+SL+LTD  G ++D + + L D    G++  P+ GA I +
Sbjct: 15  PAFSISIEGRDITTVLDNRLMSLTLTDNRGFEADQLDLELDDAD--GKIVLPRRGAVITL 72

Query: 68  WLGYPFQLKY-MGLFIADNVIVGGPPDQMTITGIASVNGETSSGKTALTDQKKRSWPSGT 126
            LG+  Q  +  G F  D +   G PD++TI   ++   ET      L  ++++SW   T
Sbjct: 73  ALGWKGQPLFPKGAFTVDEIEHTGAPDRLTIRARSADFRET------LNTRREKSWHK-T 125

Query: 127 TISALVQKIAGEHGLEHAVSESLAKVALSHIDQIDESDINLLSRIARDHDAIAKPGNGRL 186
           T+  +V++IA  H L+ A+ + L+   + HIDQ +ESD + L R+AR + AIA   NG L
Sbjct: 126 TVGEVVKEIAARHKLKMALGKDLSDKPVEHIDQTNESDGSFLMRLARQYGAIASVKNGNL 185

Query: 187 IMAKRGESLTASGAPMPVLSITPKK-----------------ISRWQYQNSTREKAGSVV 229
           +  ++G+  +A+G P+PV++IT K                  I+ W +     +K  + V
Sbjct: 186 LFIRQGQGKSATGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKKESTTV 245

Query: 230 ------AVYQDHGKGKSVECIAGEGEPKQRLKRRFPNKDAAEQAAASELQRLKRAGRGLS 283
                    +   + K  + + G  E    L R + N+  AE+AA  + +RL+R     S
Sbjct: 246 KRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFS 305

Query: 284 VTM-PGDPDAMAEAKLSAAGFRSYV-DGEWLITKAEHSLD-SGGYRTAISAE 332
           + +  G  D   E  +  +GF+  + D EW IT   H++    G+ T++  E
Sbjct: 306 LQLAEGRADLYTEMPVKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELE 357