Pairwise Alignments

Query, 335 a.a., phage late control gene D protein (GPD) from Phaeobacter inhibens DSM 17395

Subject, 386 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  149 bits (375), Expect = 1e-40
 Identities = 114/331 (34%), Positives = 176/331 (53%), Gaps = 14/331 (4%)

Query: 7   RPFFRVEVDGKDISSTLAPRLISLSLTDAAGVQSDNVQITLSDTTLFGRLAEPKAGAEIR 66
           +P   V +DG  ++     RL+SL++TD  G++SD V I L+D      LA P+ GA I 
Sbjct: 2   KPRVEVSIDGVPVAGHFYERLLSLTVTDEEGMKSDTVDIELNDGPP-NFLAIPRKGAIIS 60

Query: 67  VWLGYPFQLKYMGLFIADNVIVGGPPDQMTITGIASVNGETSSGKTALTDQKKRSWPSGT 126
           V +G+   L   G+F AD V +   P +M+I+G A+   +  SGK  L ++++RSW   +
Sbjct: 61  VKMGFGDDLVPKGVFTADKVNLDCLPYKMSISGKAA---DLRSGK--LKERQERSWDK-S 114

Query: 127 TISALVQKIAGEHGLEHAVSESLAKVALSHIDQIDESDINLLSRIARDHDAIAKPGNGRL 186
            +  ++ +IA E GL  AV + LA      + Q DES+IN L R+A  H+ +      RL
Sbjct: 115 KLGDILSQIASESGLTPAVDDDLADFEYDWLAQQDESNINFLRRLAERHNGLFAVKQRRL 174

Query: 187 IMAKRGESLTASGAPMPVLSITPKKI--SRWQYQNSTREKAGSVVAVYQDHGKGKSVECI 244
           I  + G  L+ASGAP+  + +TP+KI     + + + R K   VVA YQD  K + VE  
Sbjct: 175 IFTRLGSGLSASGAPLGSIILTPEKIKVGSLKVEINDRTKYSKVVAYYQDSDKAERVEID 234

Query: 245 A---GEGEPKQRLKRRFPNKDAAEQAAASELQRLKRAGRGLSVTMPGDPDAMAEAKLSAA 301
           A    +G+   RL   + +   A++AA ++ + L+R    +SVT+ GD    A   L  A
Sbjct: 235 ADADADGDSVYRLPEPYASPAEADKAAQAKAKELQRGEGSVSVTVIGDAGIDAGLPLLFA 294

Query: 302 GFRSYVDG-EWLITKAEHS-LDSGGYRTAIS 330
             R  VDG  ++I  A+ S   +G    A+S
Sbjct: 295 DVRPGVDGVPYIIKTAKTSYTKTGALEVAVS 325