Pairwise Alignments

Query, 283 a.a., binding protein-dependent transport system, inner membrane component from Phaeobacter inhibens DSM 17395

Subject, 298 a.a., carbohydrate ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score =  147 bits (370), Expect = 4e-40
 Identities = 83/275 (30%), Positives = 149/275 (54%), Gaps = 3/275 (1%)

Query: 8   SSRHPALAFGKYAAIAFYLGFALFPLYWLMKIAITPDALIFSEGTRMLPSAVTFENFATV 67
           ++R  A A+     +  +L  ++FP YW++  ++   A   +     L    TF ++A  
Sbjct: 27  TARRNATAWHFLGLLVVFLS-SVFPFYWMVTTSLKSQAQALAYPPVWLFKP-TFAHYAEA 84

Query: 68  LFETEFLAYFRNSLTVSLGTAFFTTLIAAGAGYAFSRFVFAGKRIIIAVMLITQMFPLLM 127
           LF  E      NSL ++  T   + L+   A YA +R+ F GK  +    +  +M   ++
Sbjct: 85  LFTHEVGGSLINSLIIASSTTVLSILLGTPAAYALARYEFRGKEDLWFWFISNRMVSPVV 144

Query: 128 IIAPIYKIVADLGLLNSLTSLIVVYTAFNIPFATFLMQSFFDGIPKDLEEAAMMDGCSRF 187
           +  P + I   L ++++   LI++Y  F++P   ++    F  IP +L+EAA +DG S +
Sbjct: 145 LAVPFFLIATKLDIVDTHIVLILLYITFSLPIVIWICTDQFRNIPVELDEAARLDGASPW 204

Query: 188 QALRTVVFPLTLPGLGATLGFVFTAAWSELLFALMLISKNDAMTFPVGLLTFVSKFSVDW 247
           +    +  PL +PG+  +  F F  +W++LL+AL+L ++ DA+T PV   +++S + + W
Sbjct: 205 RIFWRINLPLAMPGIVVSAIFAFIFSWNDLLYALVL-TRTDAITSPVAATSYMSGYELPW 263

Query: 248 GQMMAAGVLALVPSCLFFIFIQRYLVQGLTSGAVK 282
           G++MA G L ++P  +F + +   LVQGLT GAVK
Sbjct: 264 GEIMATGTLIVLPMVVFALLVSGRLVQGLTMGAVK 298